Posterior summarisation in Bayesian phylogenetics
active 2023-10-18 → 2026-04-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 925 days from 2023-10-18 to 2026-04-29. Pushes: 2 total, peak 1 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 10 total, peak 2 in a day. Comments: 14 total, peak 2 in a day. Stars: 14 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| rbouckaert | 8 | 0 | 0 | 5 |
| rambaut | 6 | 0 | 0 | 3 |
| walterxie | 5 | 0 | 0 | 3 |
| dependabot[bot] | 3 | 0 | 3 | 0 |
| msuchard | 2 | 2 | 0 | 0 |
| MarcioJRC1 | 2 | 0 | 0 | 1 |
| zholzer | 1 | 0 | 0 | 1 |
| bluesky2142 | 1 | 0 | 0 | 0 |
| Wanchengshan | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#157dependabot[bot]2025-09-27 03:20
- Pull request#187dependabot[bot]2025-09-27 03:20
- Issue#186rambaut2025-07-17 14:26Deal with situations where the Autocorrelation Time is less than the time between thinned samples
- Pull request#185dependabot[bot]2025-05-28 17:39
- Issue comment#184walterxie2024-07-31 23:54Tracer discrete value plot issues
- Issue#184walterxie2024-07-18 04:20Tracer discrete value plot issues
- Issue#183walterxie2024-06-24 01:53replace MAX_LAG = 2000 to the proportion of sample size (chain length)
- Issue comment#168Wanchengshan2024-06-16 13:10Error in plotting the Bayesian skyline plot
- Issue#182bluesky21422024-06-03 05:07OpenJDK Compatibility?
- Issue comment#17zholzer2024-05-31 17:34Feature request: command-line BSP output from Tracer
- Issue comment#168MarcioJRC12024-05-27 19:19Error in plotting the Bayesian skyline plot
- Issue#181MarcioJRC12024-05-27 18:40Error in plotting the Bayesian skyline plot
- Issue#180rambaut2024-02-22 11:17Treat constant traces as special cases
- Issue comment#179rambaut2024-02-22 11:15Tracer hangs on very low variance traces
- Issue#179rambaut2024-02-22 11:15Tracer hangs on very low variance traces
- Issue comment#179rambaut2024-02-22 10:37Tracer hangs on very low variance traces
- Issue comment#179rambaut2024-02-20 19:14Tracer hangs on very low variance traces
- Issue comment#179rbouckaert2024-02-20 18:51Tracer hangs on very low variance traces
- Issue#179rbouckaert2024-02-20 18:49Tracer hangs on very low variance traces
- Issue comment#179rbouckaert2024-02-13 06:13Tracer hangs on very low variance traces
- Issue#179rbouckaert2024-02-13 06:13Tracer hangs on very low variance traces
- Issue comment#179rbouckaert2024-02-12 07:16Tracer hangs on very low variance traces
- Issue comment#179walterxie2024-02-12 02:54Tracer hangs on very low variance traces
- Issue comment#179rbouckaert2024-02-11 23:46Tracer hangs on very low variance traces
- Issue comment#179rbouckaert2024-02-09 00:00Tracer hangs on very low variance traces
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.