active 2023-08-26 → 2026-05-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1008 days from 2023-08-26 to 2026-05-29. Pushes: 95 total, peak 8 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 16 total, peak 7 in a day. Comments: 6 total, peak 2 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| bensutherland | 117 | 95 | 0 | 6 |
Recent activity
Latest issues, pull requests and releases
- Issue#14bensutherland2025-02-26 23:07Reduce storage footprint as option (filtering)
- Issue#13bensutherland2024-03-20 20:24Flexibility required for fq/fastq naming of input files
- Issue comment#10bensutherland2023-09-06 18:40Output reports need the number of loci genotyped in each individual
- Issue#10bensutherland2023-09-06 18:40Output reports need the number of loci genotyped in each individual
- Issue#12bensutherland2023-09-06 18:38Include unassigned individuals in the report output.
- Issue comment#11bensutherland2023-09-05 22:10CKMR-sim function is too complex (all-in-one), break into components and preserve output
- Issue#11bensutherland2023-09-05 22:10CKMR-sim function is too complex (all-in-one), break into components and preserve output
- Issue#7bensutherland2023-09-01 22:34logl ratio plot should be output with the parent/offspring populations indicated in the filename
- Issue#8bensutherland2023-09-01 19:44parentage reports are being exported as space separated with quotes
- Issue#3bensutherland2023-09-01 19:37proton_to_genepop() needs hotspot_only = F implemented
- Issue comment#3bensutherland2023-09-01 19:36proton_to_genepop() needs hotspot_only = F implemented
- Issue comment#2bensutherland2023-09-01 17:50Test / demo data from variantCaller needed
- Issue#2bensutherland2023-09-01 17:50Test / demo data from variantCaller needed
- Issue#12bensutherland2023-08-28 18:25Include unassigned individuals in the report output.
- Issue#11bensutherland2023-08-28 18:18CKMR-sim function is too complex (all-in-one), break into components and preserve output
- Issue#10bensutherland2023-08-28 18:16Output reports need the number of loci genotyped in each individual
- Issue#9bensutherland2023-08-28 18:13Colour nodes in network plot by D1 or D2 (i.e., parent or offspring generation)
- Issue comment#6bensutherland2023-08-28 18:09Use load_vc function within proton_to_genepop.R
- Issue#6bensutherland2023-08-28 18:09Use load_vc function within proton_to_genepop.R
- Issue comment#5bensutherland2023-08-28 18:08Per sample mean marker coverage is needed as an output of proton_to_genepop.R
- Issue#5bensutherland2023-08-28 18:08Per sample mean marker coverage is needed as an output of proton_to_genepop.R
- Issue#1bensutherland2023-08-28 18:07Reporting needed to summarize negative control samples
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.