An R package to query various bio/chem-informatics databases APIs to construct annotation files.
active 2023-10-02 → 2026-07-15 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1018 days from 2023-10-02 to 2026-07-15. Pushes: 211 total, peak 16 in a day. Pull requests: 75 total, peak 11 in a day. Issues: 37 total, peak 3 in a day. Comments: 39 total, peak 8 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| jjjermiah | 249 | 157 | 74 | 7 |
| github-actions[bot] | 38 | 38 | 0 | 0 |
| mtran-code | 19 | 16 | 1 | 1 |
| codecov[bot] | 18 | 0 | 0 | 18 |
| sisiranair | 18 | 0 | 0 | 2 |
| coderabbitai[bot] | 15 | 0 | 0 | 9 |
| mattbocc | 6 | 0 | 0 | 0 |
| Urooj-M | 2 | 0 | 0 | 1 |
| NiktaFeizi | 2 | 0 | 0 | 1 |
| guanqiaofeng | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#91mattbocc2026-04-27 21:06Add in daily refresh memory cache for /compound/many route to speed up query
- Issue#86sisiranair2026-03-24 19:19Review Novartis PDXE QC
- Issue#65sisiranair2026-02-13 16:16Ensure toggled fields get their own column for Cellosaurus output
- Issue#63sisiranair2026-02-13 16:04Add SNOMED
- Issue#72sisiranair2025-12-23 20:38Clean up Miro board for ERD
- Issue#65sisiranair2025-12-23 20:36Ensure toggled fields get their own column for Cellosaurus output
- Issue#77sisiranair2025-12-22 20:44Add docs for AnnotationDB usage
- Issue#77sisiranair2025-12-22 20:42Add docs for AnnotationDB usage
- Issue#74mattbocc2025-12-19 16:58Add Bioassays for compounds
- Issue#65mattbocc2025-12-19 16:58Ensure toggled fields get their own column for Cellosaurus output
- Issue#72sisiranair2025-11-21 16:30Clean up Miro board for ERD
- Issue#72sisiranair2025-11-21 16:29Clean up Miro board for ERD
- Issue#64mattbocc2025-10-31 16:38Add OncoTree
- Issue comment#62sisiranair2025-10-24 16:47Add MoHCCN mCODE
- Issue#58mattbocc2025-10-24 16:04Select req columns for ChEMBL
- Issue#50mtran-code2025-10-21 21:38Feature: queryUnichem pass in list to run in parallel
- Issue comment#68codecov[bot]2025-10-21 14:54feat: enable parallel queries for unichem
- Issue comment#68coderabbitai[bot]2025-10-21 14:50feat: enable parallel queries for unichem
- Pull request#66mtran-code2025-10-21 13:57
- Issue#59mattbocc2025-10-17 14:03Select req columns for Cellosaurus
- Issue comment#52mtran-code2025-10-06 14:44AnnotationGx installation error
- Issue#62sisiranair2025-10-02 01:35Add MoHCCN mCODE
- Issue#60sisiranair2025-09-26 16:37Subset the first 20 Pubchem drug synonyms with exact character match
- Issue#59sisiranair2025-08-08 16:26Select req columns for Cellosaurus
- Issue#58sisiranair2025-08-08 16:25Select req columns for ChEMBL
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.