Registry of containerized biosimulation tools that support a standard command-line interface
active 2023-08-15 → 2026-08-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1103 days from 2023-08-15 to 2026-08-21. Pushes: 174 total, peak 19 in a day. Pull requests: 6 total, peak 2 in a day. Issues: 131 total, peak 30 in a day. Comments: 621 total, peak 22 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| biosimulators-daemon | 577 | 0 | 0 | 514 |
| renovate[bot] | 114 | 109 | 4 | 1 |
| sonarcloud[bot] | 64 | 0 | 0 | 64 |
| CodeByDrescher | 58 | 51 | 0 | 0 |
| luciansmith | 49 | 14 | 0 | 2 |
| sonarqubecloud[bot] | 40 | 0 | 0 | 40 |
| jcschaff | 13 | 0 | 1 | 0 |
| AlexPatrie | 10 | 0 | 0 | 0 |
| ssandrews | 4 | 0 | 0 | 0 |
| vcdaemon | 2 | 0 | 0 | 0 |
| dependabot[bot] | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#595sonarqubecloud[bot]2026-07-16 23:47Update dependency numpy to v1 [SECURITY]
- Pull request#725jcschaff2026-07-02 07:27
- Issue comment#595sonarqubecloud[bot]2026-04-23 14:01Update dependency numpy to <1.26.5 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-04-19 10:50Update dependency numpy to <1.26.5 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-04-16 19:12Update dependency numpy to v1 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-04-15 20:07Update dependency numpy to <1.26.5 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-04-09 00:49Update dependency numpy to v1 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-02-03 00:55Update dependency numpy to v1 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-02-02 21:04Update dependency numpy to <1.26.5 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-01-23 22:48Update dependency numpy to v1 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2026-01-23 19:06Update dependency numpy to <1.26.5 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2025-12-30 16:34Update dependency numpy to v1 [SECURITY]
- Issue comment#595sonarqubecloud[bot]2025-12-30 14:02Update dependency numpy to <1.26.5 [SECURITY]
- Pull request#719renovate[bot]2025-12-11 22:45
- Issue comment#717biosimulators-daemon2025-12-09 12:23Submit AMICI 0.34.1
- Issue comment#717biosimulators-daemon2025-12-09 12:23Submit AMICI 0.34.1
- Issue#718biosimulators-daemon2025-12-09 12:12Submit AMICI 0.34.2
- Issue comment#717biosimulators-daemon2025-12-09 11:58Submit AMICI 0.34.1
- Issue#717biosimulators-daemon2025-12-09 11:53Submit AMICI 0.34.1
- Issue#717biosimulators-daemon2025-12-09 11:53Submit AMICI 0.34.1
- Issue#716biosimulators-daemon2025-12-09 11:39Submit AMICI 0.34.0
- Issue#716biosimulators-daemon2025-12-09 11:38Submit AMICI 0.34.0
- Issue#716biosimulators-daemon2025-12-09 11:38Submit AMICI 0.34.0
- Issue comment#716biosimulators-daemon2025-12-09 11:38Submit AMICI 0.34.0
- Issue comment#716biosimulators-daemon2025-12-09 11:13Submit AMICI 0.34.0
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.