Tool for DNA species identification based on variation in short k-mer frequencies
active 2024-01-18 → 2026-07-07 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 902 days from 2024-01-18 to 2026-07-07. Pushes: 40 total, peak 9 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 9 total, peak 1 in a day. Comments: 22 total, peak 4 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| brunoasm | 52 | 40 | 3 | 6 |
| theo-allnutt-bioinformatics | 18 | 0 | 0 | 13 |
| Copilot | 5 | 0 | 0 | 3 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#28brunoasm2025-09-30 15:58REesuming training
- Issue comment#29brunoasm2025-09-30 15:21Unwanted behavior in conda install
- Issue comment#30brunoasm2025-09-30 15:19varKoder train timm error
- Issue comment#22theo-allnutt-bioinformatics2025-09-29 02:17Training model locally
- Issue#30theo-allnutt-bioinformatics2025-09-23 06:03varKoder train timm error
- Issue comment#29theo-allnutt-bioinformatics2025-09-23 04:49Unwanted behavior in conda install
- Issue#28theo-allnutt-bioinformatics2025-09-19 02:02REesuming training
- Releasebrunoasm2025-09-10 21:50varKoder v1.5.0
- Issue#26theo-allnutt-bioinformatics2025-08-29 05:19Parsing probabilities
- Issue comment#25theo-allnutt-bioinformatics2025-08-28 03:26SRA model .pkl file error AttributeError: 'Attention' object has no attribute 'norm'. Did you mean: 'k_norm'?
- Issue#25brunoasm2025-08-22 22:17SRA model .pkl file error AttributeError: 'Attention' object has no attribute 'norm'. Did you mean: 'k_norm'?
- Issue comment#22theo-allnutt-bioinformatics2025-08-19 02:54Training model locally
- Issue#22theo-allnutt-bioinformatics2025-08-19 02:54Training model locally
- Releasebrunoasm2025-08-18 22:10v1.4.0
- Issue#23brunoasm2025-08-18 22:00varKoder: error: unrecognized arguments: -t 0.5
- Pull request#24brunoasm2025-08-18 21:59
- Issue comment#22theo-allnutt-bioinformatics2025-08-08 04:30Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-08 02:29Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-08 01:31Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-08 01:13Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-07 04:29Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-07 04:16Training model locally
- Issue comment#22theo-allnutt-bioinformatics2025-08-06 06:28Training model locally
- Issue comment#22brunoasm2025-08-05 17:18Training model locally
- Issue#22theo-allnutt-bioinformatics2025-07-31 03:14Training model locally
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.