Processing pipeline of whole genome sequence data for ~140 species of fish involving extraction and assembly of mitochondrial data for each species. Focus on reproducibility, error handling and robust event reporting, and code portability for future batches of mitogenomes.
active 2026-06-01 → 2026-08-19 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 80 days from 2026-06-01 to 2026-08-19. Pushes: 34 total, peak 6 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 14 total, peak 4 in a day. Comments: 0 total, peak 0 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| cacayan2 | 48 | 34 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#372cacayan22026-08-19 00:422026-10-15 — Implement BioSample metadata table generator
- Issue#283cacayan22026-08-19 00:262026-09-22 — Fix complete E2E release-blocking defects
- Issue#170cacayan22026-08-18 23:552026-08-23 — Finalize v0.2.0 release scope
- Issue#158cacayan22026-08-18 23:50Finalize BLAST validation workflow
- Issue#144cacayan22026-07-03 04:33Generate publication-quality circular mitogenome maps (2026-07-13)
- Issue#99cacayan22026-06-23 19:22Parse fastp statistics (2026-06-08)
- Issue#95cacayan22026-06-19 05:48Create FastQC execution layer (2026-06-08)
- Issue#129cacayan22026-06-05 01:56Create archival validation report (2026-07-06)
- Issue#124cacayan22026-06-05 01:56Define NCBI and SRA archival requirements (2026-06-22)
- Issue#86cacayan22026-06-04 01:51Establish logging framework (2026-06-01)
- Issue#7cacayan22026-06-02 23:31Configure Python project
- Issue#39cacayan22026-06-02 22:07Create installation guide
- Issue#37cacayan22026-06-02 22:07Benchmark runtime and resource usage
- Issue#36cacayan22026-06-02 22:07Add end-to-end pipeline validation
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.