Tools for building and calibrating compartmental models of infectious disease.
active 2023-08-15 → 2026-03-12 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 941 days from 2023-08-15 to 2026-03-12. Pushes: 1,482 total, peak 68 in a day. Pull requests: 97 total, peak 5 in a day. Issues: 281 total, peak 10 in a day. Comments: 472 total, peak 19 in a day. Stars: 6 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| stevencarlislewalker | 1.4K | 845 | 79 | 302 |
| github-actions[bot] | 405 | 405 | 0 | 0 |
| jfree-man | 223 | 157 | 4 | 33 |
| bbolker | 192 | 39 | 13 | 93 |
| papsti | 60 | 26 | 1 | 15 |
| dushoff | 29 | 0 | 0 | 17 |
| Flynn-Primrose | 9 | 9 | 0 | 0 |
| RichardSichengZhao | 8 | 0 | 0 | 5 |
| jaganmn | 5 | 1 | 0 | 2 |
| davidearn | 3 | 0 | 0 | 3 |
| GregForkutza | 3 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#268stevencarlislewalker2025-08-19 02:57layout machinery fails
- Issue#352stevencarlislewalker2025-08-18 14:38End of November 2025
- Issue comment#351stevencarlislewalker2025-08-06 19:52Granich calibration example infelicity
- Issue#351stevencarlislewalker2025-08-06 19:52Granich calibration example infelicity
- Issue comment#350stevencarlislewalker2025-08-06 18:57Collapse option for trajectories?
- Issue comment#351stevencarlislewalker2025-08-06 13:51Granich calibration example infelicity
- Issue comment#351dushoff2025-08-06 02:01Granich calibration example infelicity
- Issue comment#350dushoff2025-08-06 01:54Collapse option for trajectories?
- Issue comment#351stevencarlislewalker2025-08-05 20:34Granich calibration example infelicity
- Issue comment#350stevencarlislewalker2025-08-05 20:09Collapse option for trajectories?
- Issue#349stevencarlislewalker2025-08-05 15:40Weird mgc reports
- Issue comment#349dushoff2025-08-05 13:49Weird mgc reports
- Issue#351dushoff2025-08-05 03:11Granich calibration example infelicity
- Issue#350dushoff2025-08-04 11:21Collapse option for trajectories?
- Issue#349dushoff2025-08-04 11:18Weird mgc reports
- Pull request#348stevencarlislewalker2025-07-12 14:18
- Issue#342stevencarlislewalker2025-07-09 20:13(breaking change) global rename neg_bin -> nbinom?
- Pull request#347stevencarlislewalker2025-07-09 20:13
- Issue comment#342stevencarlislewalker2025-07-03 20:31(breaking change) global rename neg_bin -> nbinom?
- Pull request#347stevencarlislewalker2025-07-03 20:23
- Issue#346stevencarlislewalker2025-06-27 14:23revise likelihood_prior_specs article
- Issue comment#340stevencarlislewalker2025-06-27 14:06time step documentation?
- Pull request#344bbolker2025-06-27 13:05
- Issue comment#343RichardSichengZhao2025-06-27 01:11still confused about setting up a negative binomial likelihood
- Issue#342bbolker2025-06-26 23:50(breaking change) global rename neg_bin -> nbinom?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 6 stars here means stars gained during the window, not the repo's star count.