High-resolution Tumor Micro-Environment cell type classification and compositional analysis for scRNA-seq
active 2023-12-16 → 2026-01-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 763 days from 2023-12-16 to 2026-01-16. Pushes: 198 total, peak 10 in a day. Pull requests: 16 total, peak 6 in a day. Issues: 44 total, peak 8 in a day. Comments: 21 total, peak 4 in a day. Stars: 7 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| halterc | 152 | 99 | 0 | 14 |
| JGarnica22 | 118 | 96 | 16 | 3 |
| NoemieL | 5 | 0 | 0 | 4 |
| sjcarmona | 3 | 3 | 0 | 0 |
| AntonioMatera | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#42halterc2025-08-08 16:35Run.HiTME can get stuck
- Issue#40JGarnica222025-03-03 16:06Function "get.HiTObject()" does not exist
- Issue comment#40JGarnica222025-01-13 14:21Function "get.HiTObject()" does not exist
- Issue#40AntonioMatera2024-11-20 11:07Function "get.HiTObject()" does not exist
- Pull request#39JGarnica222024-10-18 15:56
- Pull request#38JGarnica222024-10-07 18:00
- Pull request#37JGarnica222024-09-30 10:04
- Pull request#37JGarnica222024-09-30 10:04
- Pull request#36JGarnica222024-09-30 08:40
- Pull request#36JGarnica222024-09-30 08:40
- Pull request#35JGarnica222024-09-30 08:27
- Pull request#35JGarnica222024-09-30 08:27
- Pull request#34JGarnica222024-08-29 11:02
- ReleaseJGarnica222024-08-27 13:31HiTME version 2.0.0
- Pull request#33JGarnica222024-08-27 13:14
- Issue#11halterc2024-07-09 10:03Optional: get.cluster.score: Add Density-Based Clustering Validation (DBCV)
- Issue#32halterc2024-06-21 09:26Remove/reduce unnecessary dependencies
- Issue#31halterc2024-06-18 14:17To combine modules, set non-present cell types to 0
- Issue#30halterc2024-06-18 14:16PCA based on raw features + PCA based on sample distances
- Issue#29halterc2024-06-18 14:14get.HiTObject: aggregated_profile, pseudobulk, layer1 "all" not computed for all samples
- Issue#29halterc2024-06-07 14:45get.HiTObject: aggregated_profile, pseudobulk, layer1 "all" not computed for all samples
- Issue#28halterc2024-06-07 14:12Find clusters, e.g. on PCA -> correlate with metadata / highlight which composition,pb,sig shows clear clusters
- Issue#27halterc2024-06-07 14:07Optional: Add function: HiTObject.drop_celltype
- Issue#27halterc2024-06-07 14:05Optional: Add function: HiTObject.drop_celltype
- Issue#21halterc2024-06-07 12:39Save sample distances to HiTObject
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 7 stars here means stars gained during the window, not the repo's star count.