Reimplementation of a bblab ruby script in python.
active 2025-08-12 → 2026-06-02 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 295 days from 2025-08-12 to 2026-06-02. Pushes: 26 total, peak 5 in a day. Pull requests: 16 total, peak 4 in a day. Issues: 11 total, peak 4 in a day. Comments: 6 total, peak 2 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| rhliang | 50 | 25 | 15 | 1 |
| va7eex | 7 | 1 | 1 | 1 |
| codecov[bot] | 4 | 0 | 0 | 4 |
Recent activity
Latest issues, pull requests and releases
- Issue#22rhliang2026-04-28 23:33Algorithm uses a lot of RAM.
- Pull request#21rhliang2026-03-16 23:06
- Issue#18va7eex2026-01-09 20:55Define a proper Pydantic model for the values returned by `HLAAlgorithm.combine_standards_stepper`
- Pull request#19rhliang2026-01-09 20:55
- Issue comment#20rhliang2026-01-09 19:45Tests fail on Python 3.14 on ARM, likely due to Pydantic incompatibility
- Issue comment#19codecov[bot]2025-12-23 22:01Separate logic that combines matching allele pairs into its own method
- Pull request#19rhliang2025-12-23 22:00
- Pull request#19rhliang2025-12-23 22:00
- Issue#18rhliang2025-12-23 19:47Define a proper Pydantic model for the values returned by `HLAAlgorithm.combine_standards_stepper`
- Issue#18rhliang2025-12-23 19:47Define a proper Pydantic model for the values returned by `HLAAlgorithm.combine_standards_stepper`
- Issue#17rhliang2025-12-23 19:44Separate the logic that combines matching allele pairs into combined standards in `HLAAlgorithm.combine_standards`
- Issue#17rhliang2025-12-23 19:44Separate the logic that combines matching allele pairs into combined standards in `HLAAlgorithm.combine_standards`
- Issue#16va7eex2025-09-30 16:01Vectorize computation operations
- Releaserhliang2025-09-09 22:31v1.0.0
- Pull request#15va7eex2025-09-09 22:29
- Issue comment#15va7eex2025-09-09 22:29Incorporated David's suggestion that allows us to eliminate the shim …
- Issue comment#14codecov[bot]2025-09-09 20:28Small tweak to the yamllint configuration.
- Pull request#14rhliang2025-09-09 20:27
- Pull request#13rhliang2025-09-09 19:42
- Pull request#13rhliang2025-09-04 23:52
- Pull request#12rhliang2025-08-28 23:12
- Releaserhliang2025-08-28 22:35v1.0.0-rc4
- Issue#9rhliang2025-08-28 22:34Sort allele pairs (internally and externally) by coordinate order rather than alphabetical order
- Issue#11rhliang2025-08-28 22:34"Best common allele pair" can miss possibilities where one of the best common alleles is in different positions of the pairs
- Pull request#10rhliang2025-08-28 22:34
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.