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R package for inferring copy number from read depth

active 2024-01-172024-12-06 (UTC)

Complete coverage26,489 / 26,489 hourly files (100%) · 2 absent upstream2023-08-152026-08-22 (UTC)
Events
32
Pushes
0
Pull requests
0
Issues
9
Stars
4
Forks
1

Activity over time

Daily event counts in the loaded window

Line chart, 325 days from 2024-01-17 to 2024-12-06. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 9 total, peak 1 in a day. Comments: 18 total, peak 4 in a day. Stars: 4 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
chrisamiller11007
indxAi6004
newpest5003
kenji-yt4003
MajidGene1001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#18newpest2024-06-26 06:07
    Running time is too long
  • Issue#18newpest2024-06-26 05:03
    Running time is too long
  • Issue comment#16kenji-yt2024-06-17 08:00
    Methylation Correction: Non-Covered Sites
  • Issue comment#17chrisamiller2024-06-17 02:42
    cannot open the connection
  • Issue comment#17newpest2024-06-15 04:25
    cannot open the connection
  • Issue comment#17newpest2024-06-15 04:16
    cannot open the connection
  • Issue comment#16chrisamiller2024-06-14 17:58
    Methylation Correction: Non-Covered Sites
  • Issue comment#17chrisamiller2024-06-14 13:14
    cannot open the connection
  • Issue#17newpest2024-06-14 06:23
    cannot open the connection
  • Issue comment#16kenji-yt2024-06-13 18:52
    Methylation Correction: Non-Covered Sites
  • Issue#16chrisamiller2024-06-13 18:29
    Methylation Correction: Non-Covered Sites
  • Issue comment#16kenji-yt2024-06-13 18:26
    Methylation Correction: Non-Covered Sites
  • Issue#16kenji-yt2024-06-03 11:44
    Methylation Correction: Non-Covered Sites
  • Issue#15chrisamiller2024-04-10 15:59
    downloading annotations
  • Issue comment#15MajidGene2024-04-10 15:56
    downloading annotations
  • Issue comment#14chrisamiller2024-04-09 14:52
    Interpretation of Copy Number Alteration Analysis Results
  • Issue#14chrisamiller2024-04-09 14:52
    Interpretation of Copy Number Alteration Analysis Results
  • Issue#14indxAi2024-03-01 06:33
    Interpretation of Copy Number Alteration Analysis Results
  • Issue comment#13indxAi2024-02-16 08:27
    Help Needed with readDepth Tool Installation and Usage
  • Issue comment#13indxAi2024-02-16 05:27
    Help Needed with readDepth Tool Installation and Usage
  • Issue#6chrisamiller2024-02-15 22:22
    Error in (amed + 1):(bmed - 1) : result would be too long a vector
  • Issue comment#13chrisamiller2024-02-15 22:21
    Help Needed with readDepth Tool Installation and Usage
  • Issue comment#13indxAi2024-02-15 03:31
    Help Needed with readDepth Tool Installation and Usage
  • Issue comment#13chrisamiller2024-02-15 03:29
    Help Needed with readDepth Tool Installation and Usage
  • Issue comment#13indxAi2024-02-15 02:07
    Help Needed with readDepth Tool Installation and Usage

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.