A collection of objects and functions to work with calling cards sequencing tools. See docs at https://cmatkhan.github.io/callingCardsTools
active 2023-10-10 → 2025-12-31 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 814 days from 2023-10-10 to 2025-12-31. Pushes: 56 total, peak 11 in a day. Pull requests: 6 total, peak 4 in a day. Issues: 21 total, peak 3 in a day. Comments: 10 total, peak 3 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| cmatKhan | 69 | 35 | 6 | 10 |
| github-actions[bot] | 21 | 21 | 0 | 0 |
| marialexandra16 | 3 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#22cmatKhan2025-12-31 18:06Supplemental reads' primary component not filtered out
- Issue#21cmatKhan2025-12-05 16:43Rename yeast_peak_calling to yeast_promoter_enrichment
- Issue#20cmatKhan2025-06-24 21:09barcode counter needs improvement
- Issue#19cmatKhan2025-06-24 20:51add r1 primer and r2 transposon to bamflag
- ReleasecmatKhan2025-03-07 23:011.8.1
- Pull request#18cmatKhan2025-03-07 23:01
- Pull request#18cmatKhan2025-03-07 23:00
- Issue#16cmatKhan2025-03-07 22:57Error in poisson pvalue calcuation
- Issue#16cmatKhan2025-03-07 22:57Error in poisson pvalue calcuation
- Pull request#17cmatKhan2025-03-07 22:57
- Pull request#17cmatKhan2025-03-07 19:58
- Issue#16cmatKhan2025-03-06 19:31Error in poisson pvalue calcuation
- Issue#15cmatKhan2024-10-23 21:50some data results in * in start/end
- ReleasecmatKhan2024-09-11 17:161.8.0
- ReleasecmatKhan2024-07-02 20:391.7.1
- ReleasecmatKhan2024-07-02 20:381.7.0
- Issue#14cmatKhan2024-06-19 15:06When parsing fastq file, convert to BAM
- ReleasecmatKhan2024-03-14 20:521.5.1
- Issue comment#12cmatKhan2024-03-14 19:40Fix LTR to LRT typo on mammals barcode details docs
- Issue comment#12cmatKhan2024-03-14 19:34Fix LTR to LRT typo on mammals barcode details docs
- Issue#12cmatKhan2024-03-14 19:34Fix LTR to LRT typo on mammals barcode details docs
- Issue comment#13cmatKhan2024-03-14 19:33change order of chrmap_data_path and deduplicate in PeakCalling.yeast.call_peaks
- Issue#13cmatKhan2024-03-14 19:33change order of chrmap_data_path and deduplicate in PeakCalling.yeast.call_peaks
- Issue#13cmatKhan2024-03-14 18:25change order of chrmap_data_path and deduplicate in PeakCalling.yeast.call_peaks
- ReleasecmatKhan2024-03-14 00:421.5.0
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.