The MitoGeneExtractor can be used to extract protein coding mitochondrial genes, such as COI and others from short and long read sequencing libraries.
active 2023-08-15 → 2025-12-09 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 848 days from 2023-08-15 to 2025-12-09. Pushes: 19 total, peak 5 in a day. Pull requests: 2 total, peak 1 in a day. Issues: 12 total, peak 2 in a day. Comments: 38 total, peak 5 in a day. Stars: 14 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| cmayer | 33 | 17 | 1 | 15 |
| marievalerie | 16 | 2 | 0 | 10 |
| jrpletch | 4 | 0 | 0 | 3 |
| SchistoDan | 4 | 0 | 1 | 2 |
| Linnaeus001 | 3 | 0 | 0 | 2 |
| 000generic | 2 | 0 | 0 | 1 |
| ladywaspzhu | 2 | 0 | 0 | 1 |
| AlbertoPiris | 2 | 0 | 0 | 2 |
| daicy527 | 1 | 0 | 0 | 1 |
| zoccola | 1 | 0 | 0 | 1 |
| rvosa | 1 | 0 | 0 | 0 |
| riksub | 1 | 0 | 0 | 0 |
| carla-hazelf | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#18cmayer2025-09-24 13:11Update MitoGeneExtractor.cpp (v1.9.6 conflict merging unresolved error)
- Releasecmayer2025-09-24 12:34Release v1.9.6
- Issue comment#9zoccola2025-08-08 06:38conda?
- Issue comment#17cmayer2025-06-18 11:51"make" issue
- Issue comment#17daicy5272025-06-18 08:16"make" issue
- Issue comment#17cmayer2025-06-17 13:41"make" issue
- Issue comment#14cmayer2025-04-24 22:39MGE memory-related errors - 'Aborted (core dumped)' & 'Segmentation fault (core dumped)'
- Issue comment#14cmayer2025-04-01 17:54MGE memory-related errors - 'Aborted (core dumped)' & 'Segmentation fault (core dumped)'
- Issue comment#16cmayer2025-04-01 17:45Fastq file could not be opened
- Issue comment#14cmayer2025-03-19 16:41MGE memory-related errors - 'Aborted (core dumped)' & 'Segmentation fault (core dumped)'
- Issue comment#14SchistoDan2025-03-17 15:10MGE memory-related errors - 'Aborted (core dumped)' & 'Segmentation fault (core dumped)'
- Issue comment#11cmayer2024-12-02 01:45Running exonerate failed
- Issue comment#14cmayer2024-12-02 01:41MGE memory-related errors - 'Aborted (core dumped)' & 'Segmentation fault (core dumped)'
- Issue comment#16cmayer2024-11-10 14:16Fastq file could not be opened
- Issue comment#16marievalerie2024-11-08 20:17Fastq file could not be opened
- Issue comment#16jrpletch2024-11-08 20:03Fastq file could not be opened
- Issue comment#16marievalerie2024-11-08 19:53Fastq file could not be opened
- Issue comment#16jrpletch2024-11-08 19:41Fastq file could not be opened
- Issue comment#16marievalerie2024-11-08 19:18Fastq file could not be opened
- Issue comment#16jrpletch2024-11-07 17:44Fastq file could not be opened
- Issue#12marievalerie2024-11-05 19:11Dealing with introns
- Issue#10marievalerie2024-11-05 19:10Consensus COI reference sequences for major groups in BOLD
- Issue comment#16marievalerie2024-11-02 18:34Fastq file could not be opened
- Issue#16jrpletch2024-10-31 20:26Fastq file could not be opened
- Issue comment#15Linnaeus0012024-10-10 16:35Sequence names in the DNA read file are not unique
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.