Benchmarks for CytoTable and related.
active 2023-10-17 → 2025-10-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 731 days from 2023-10-17 to 2025-10-16. Pushes: 7 total, peak 2 in a day. Pull requests: 14 total, peak 2 in a day. Issues: 7 total, peak 3 in a day. Comments: 28 total, peak 6 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| d33bs | 55 | 7 | 14 | 19 |
| gwaybio | 14 | 0 | 0 | 7 |
| falquaddoomi | 4 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Released33bs2025-10-16 14:02v0.0.2
- Pull request#16d33bs2025-09-16 14:47
- Issue comment#16d33bs2025-09-16 14:47Fix CytoTable and Pycytominer SQLite plot x-axis ordering
- Pull request#17d33bs2025-09-12 20:12
- Issue comment#14d33bs2025-09-09 22:00Add real-world dataset benchmarks (e.g. JUMP, or LINCs)
- Issue#14d33bs2025-09-09 22:00Add real-world dataset benchmarks (e.g. JUMP, or LINCs)
- Pull request#15d33bs2025-09-08 02:23
- Issue comment#15d33bs2025-09-06 21:32Add anndata benchmark comparisons with parquet
- Issue comment#15gwaybio2025-09-03 22:15Add anndata benchmark comparisons with parquet
- Pull request#15d33bs2025-09-03 22:06
- Issue comment#9d33bs2025-08-11 20:20Average benchmarks based on many runs instead of one
- Issue comment#3d33bs2025-08-11 20:19Investigate syntactical complexity of CytoTable dependencies
- Issue#3d33bs2025-08-11 20:19Investigate syntactical complexity of CytoTable dependencies
- Issue comment#10d33bs2025-08-11 20:18Add CITATION.cff file and integrate with Zenodo
- Issue#10d33bs2025-08-11 20:18Add CITATION.cff file and integrate with Zenodo
- Issue#13d33bs2025-06-18 19:12Add AnnData benchmarking comparisons
- Issue comment#12d33bs2025-05-15 15:34Add DOI to readme and `CITATION.cff`
- Pull request#12d33bs2025-05-15 15:18
- Pull request#11d33bs2025-05-15 15:18
- Released33bs2025-05-15 15:12v0.0.1
- Pull request#11d33bs2025-05-14 22:15
- Issue#10d33bs2025-04-28 16:27Add CITATION.cff file and integrate with Zenodo
- Issue#9d33bs2025-04-28 16:26Average benchmarks based on many runs instead of one
- Issue comment#2d33bs2025-04-28 16:25Explore pycytominer merge and related capabilities
- Issue#2d33bs2025-04-28 16:25Explore pycytominer merge and related capabilities
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.