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rtrees: an R package to assemble phylogenetic trees from mega-trees

active 2023-09-072026-06-05 (UTC)

Partial coverage20,534 / 26,290 hourly files (78%) · 2 absent upstream · 5,753 failed, retryable2023-08-152026-08-14 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
34
Pushes
13
Pull requests
0
Issues
3
Stars
6
Forks
3

Activity over time

Daily event counts in the loaded window

Line chart, 1003 days from 2023-09-07 to 2026-06-05. Pushes: 13 total, peak 3 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 3 total, peak 1 in a day. Comments: 8 total, peak 3 in a day. Stars: 6 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
daijiang9702
github-actions[bot]6600
wxy231163002
bichengdong3002

Recent activity

Latest issues, pull requests and releases

  • Issue comment#9jkleinkopf2025-07-20 17:14
    Error adding taxa to a user provided tree?
  • Issue comment#9daijiang2025-07-20 06:14
    Error adding taxa to a user provided tree?
  • Issue#9jkleinkopf2025-07-19 21:06
    Error adding taxa to a user provided tree?
  • Issue#8bichengdong2025-03-08 14:29
    An unexpected halt while constructing a phylogenetic tree
  • Issue comment#8bichengdong2025-03-08 14:29
    An unexpected halt while constructing a phylogenetic tree
  • Issue comment#8bichengdong2025-03-08 08:46
    An unexpected halt while constructing a phylogenetic tree
  • Issue comment#7daijiang2023-10-12 03:12
    Tree has no branch lengths, cannot compute pd
  • Issue comment#7wxy231162023-10-11 05:08
    Tree has no branch lengths, cannot compute pd
  • Issue comment#7wxy231162023-10-11 05:08
    Tree has no branch lengths, cannot compute pd
  • Issue comment#7daijiang2023-10-11 03:38
    Tree has no branch lengths, cannot compute pd
  • Issue#7wxy231162023-10-11 03:27
    Tree has no branch lengths, cannot compute pd

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 6 stars here means stars gained during the window, not the repo's star count.