The panvaR codebase.
active 2025-07-29 → 2026-08-13 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 381 days from 2025-07-29 to 2026-08-13. Pushes: 121 total, peak 9 in a day. Pull requests: 10 total, peak 3 in a day. Issues: 16 total, peak 4 in a day. Comments: 4 total, peak 1 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| cluebbert | 123 | 95 | 10 | 3 |
| github-actions[bot] | 23 | 23 | 0 | 0 |
| phloz | 2 | 2 | 0 | 0 |
| prashantbhandari87 | 2 | 0 | 0 | 1 |
| VectorFrankenstein | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#62prashantbhandari872026-05-12 20:30make_panvar_inputs() error while trying to reproduce shattering example from the package
- Issue#58cluebbert2026-03-12 18:59retain snp score variables
- Issue comment#56cluebbert2026-03-04 23:03clumping speed up
- Issue#56cluebbert2026-03-04 22:58clumping speed up
- Pull request#54cluebbert2026-02-27 18:51
- Issue#53cluebbert2026-02-20 20:39add ability to highlight certain points on manhattan
- Issue#15cluebbert2026-02-10 22:58Add ability to include variant effect scores
- Issue#24cluebbert2026-02-10 22:57Evaluate need for VCFtools
- Issue comment#24cluebbert2026-02-10 22:57Evaluate need for VCFtools
- Issue#26cluebbert2026-02-10 22:54Add ability to provide bed format to main function
- Pull request#47cluebbert2026-02-09 20:38
- Pull request#45cluebbert2026-02-03 20:10
- Pull request#44cluebbert2026-01-28 22:38
- Issue#38cluebbert2026-01-22 20:00create PCA visualization function
- Pull request#36cluebbert2026-01-22 19:46
- Pull request#34cluebbert2026-01-21 20:08
- Pull request#33cluebbert2026-01-20 23:07
- Pull request#31cluebbert2026-01-20 22:58
- Issue#30cluebbert2026-01-20 22:28add option to supply pc's from file
- Pull request#28cluebbert2026-01-20 20:48
- Issue comment#26cluebbert2026-01-20 17:54Add ability to provide bed format to main function
- Pull request#25cluebbert2025-12-03 21:55
- Issue#23cluebbert2025-11-20 22:09Split main panvar_func() into 2 functions
- Issue#19cluebbert2025-11-20 21:56left join error in setaria when passing precomputed gwas pvalues
- Issue#19prashantbhandari872025-11-20 16:50left join error in setaria when passing precomputed gwas pvalues
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.