A suite of tools, data models, etc. for extracting data from documents (e.g. papers) and evaluating the performance of such extraction tasks.
active 2026-04-07 → 2026-08-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 121 days from 2026-04-07 to 2026-08-05. Pushes: 112 total, peak 9 in a day. Pull requests: 4 total, peak 1 in a day. Issues: 10 total, peak 2 in a day. Comments: 43 total, peak 14 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mcallaghan | 94 | 66 | 3 | 8 |
| nikloynes | 26 | 8 | 1 | 16 |
| github-actions[bot] | 18 | 10 | 0 | 8 |
| kaitlynhair | 10 | 3 | 0 | 5 |
| IshitaGopal | 9 | 7 | 0 | 2 |
| L-ENA | 7 | 5 | 0 | 2 |
| harryjmoss | 6 | 6 | 0 | 0 |
| VJonah | 4 | 1 | 0 | 1 |
| sagaruprety | 4 | 4 | 0 | 0 |
| AilbheF | 1 | 1 | 0 | 0 |
| Copilot | 1 | 0 | 0 | 1 |
| renovate[bot] | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#314mcallaghan2026-07-29 14:54
- Issue#323mcallaghan2026-07-02 12:38Non-meaningful columns in csv-files raise an error
- Issue#323mcallaghan2026-07-02 12:38Non-meaningful columns in csv-files raise an error
- Issue comment#275github-actions[bot]2026-06-04 10:51Revise DEET sys prompt
- Issue comment#99kaitlynhair2026-06-01 10:54Response format passed to LLM does not ensure desired response
- Issue comment#272github-actions[bot]2026-05-29 08:23Merge main into dev
- Issue comment#244github-actions[bot]2026-05-23 10:21Feature/241 extraction without linking or evaluating
- Issue#273mcallaghan2026-05-21 11:05Providing unsupported parameters to a model causes an error
- Issue comment#207kaitlynhair2026-05-18 10:32Determine process for versioning updates once v1 release public
- Pull request#251nikloynes2026-04-30 15:57
- Issue#134mcallaghan2026-04-27 07:54Create generic DEET converter
- Issue comment#153mcallaghan2026-04-25 16:43method for coercing `output_data` to correct `AttributeType` in `GoldStandardAnnotation`
- Pull request#243mcallaghan2026-04-24 08:54
- Issue#241mcallaghan2026-04-23 18:36Extract data without gold standard annotation data
- Issue comment#207kaitlynhair2026-04-23 13:46Determine process for versioning updates once v1 release public
- Pull request#235mcallaghan2026-04-23 07:04
- Issue#238mcallaghan2026-04-22 12:46Add instructions to install the right version of python with uv to docs
- Issue comment#235github-actions[bot]2026-04-22 07:43restore eppiconverter logic from PR#117, make sure boolean annotations are set to True if they exist in EppiJson
- Issue comment#235github-actions[bot]2026-04-21 09:37restore eppiconverter logic from PR#117, make sure boolean annotations are set to True if they exist in EppiJson
- Issue comment#198kaitlynhair2026-04-20 10:29Retaining external identifiers when coercing into DEET-supported identifiers
- Issue comment#86kaitlynhair2026-04-20 08:47create MVP CSV-EPPI converter
- Issue#86kaitlynhair2026-04-20 08:47create MVP CSV-EPPI converter
- Issue comment#229github-actions[bot]2026-04-15 00:33Feature/evaluator fails gracefully
- Issue comment#229github-actions[bot]2026-04-15 00:17Feature/evaluator fails gracefully
- Issue#228mcallaghan2026-04-14 19:37Fail more gracefully when trying to evaluate
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.