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A tree simulator for birth-death-mutation-sampling processes

active 2024-08-182025-10-21 (UTC)

Complete coverage26,483 / 26,483 hourly files (100%) · 2 absent upstream2023-08-152026-08-22 (UTC)
Events
44
Pushes
15
Pull requests
4
Issues
3
Stars
4
Forks
1

Activity over time

Daily event counts in the loaded window

Line chart, 430 days from 2024-08-18 to 2025-10-21. Pushes: 15 total, peak 6 in a day. Pull requests: 4 total, peak 2 in a day. Issues: 3 total, peak 2 in a day. Comments: 8 total, peak 3 in a day. Stars: 4 total, peak 1 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
wsdewitt11424
cbennington85211612
WSDeWitt5500
magdalenarussell2011
LeoFeatherstone1001

Recent activity

Latest issues, pull requests and releases

  • Issue comment#13magdalenarussell2025-10-21 19:02
    Fixing tree slicing bug and adding attribute argument to constant process
  • Pull request#13magdalenarussell2025-10-20 23:04
  • Pull request#10cbennington8522025-06-30 20:46
  • Issue comment#8cbennington8522025-06-30 19:43
    DiscreteMutator allows for a non-zero diagonal in transition matrix
  • Issue comment#8wsdewitt2025-06-30 19:02
    DiscreteMutator allows for a non-zero diagonal in transition matrix
  • Issue comment#9cbennington8522025-06-30 17:36
    Input Validation [ Birth proccess, Death Proccess , Mutation Proccess]
  • Issue comment#9wsdewitt2025-06-27 05:24
    Input Validation [ Birth proccess, Death Proccess , Mutation Proccess]
  • Issue comment#8wsdewitt2025-06-27 05:19
    DiscreteMutator allows for a non-zero diagonal in transition matrix
  • Issue#9cbennington8522025-06-25 21:38
    Input Validation [ Birth proccess, Death Proccess , Mutation Proccess]
  • Issue#8cbennington8522025-06-25 21:21
    DiscreteMutator allows for a non-zero diagonal in transition matrix
  • Issue comment#7LeoFeatherstone2025-06-14 10:14
    I there a method for continuous (in time) sampling?
  • Issue comment#7wsdewitt2025-06-14 00:51
    I there a method for continuous (in time) sampling?
  • Releasewsdewitt2024-12-22 03:14
    v0.6.0
  • Pull request#6wsdewitt2024-12-22 03:08
  • Pull request#6wsdewitt2024-12-22 02:58
  • Issue#5wsdewitt2024-09-25 04:57
    API docs not rendering

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.