Framework for modified sampling from biomolecular generative models
active 2026-01-26 → 2026-08-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 197 days from 2026-01-26 to 2026-08-10. Pushes: 229 total, peak 10 in a day. Pull requests: 39 total, peak 5 in a day. Issues: 66 total, peak 11 in a day. Comments: 316 total, peak 36 in a day. Stars: 4 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| marcuscollins | 252 | 73 | 12 | 109 |
| k-chrispens | 224 | 61 | 12 | 63 |
| coderabbitai[bot] | 209 | 3 | 0 | 107 |
| DorisMai | 40 | 23 | 3 | 4 |
| Abdelsalam-Abbas | 39 | 31 | 3 | 0 |
| Copilot | 38 | 0 | 0 | 26 |
| xraymemory | 30 | 16 | 5 | 3 |
| diffuse-semantic-release[bot] | 9 | 9 | 0 | 0 |
| smallfishabc | 6 | 6 | 0 | 0 |
| zamadye | 5 | 0 | 2 | 3 |
| denis-zaitsev | 4 | 4 | 0 | 0 |
| jlee733 | 1 | 1 | 0 | 0 |
| saada | 1 | 0 | 1 | 0 |
| rtviii | 1 | 0 | 1 | 0 |
| ManjunathByadagi | 1 | 0 | 0 | 1 |
| mag-astera | 1 | 1 | 0 | 0 |
| github-actions[bot] | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#305xraymemory2026-07-23 18:23Add a physical-plausibility reward (all-atom energy) to complement density-only guidance?
- Issue comment#333coderabbitai[bot]2026-07-21 23:24fix(tests): remove hydrogens from structure test fixtures to align with what we do in real use.
- Issue#311marcuscollins2026-07-10 22:56Update to use newer type parameters
- Pull request#301rtviii2026-07-03 14:39
- Issue#146xraymemory2026-06-19 17:20Add/check occupancy input validation
- Pull request#253xraymemory2026-06-02 15:37
- Pull request#245xraymemory2026-06-01 04:14
- Issue#248DorisMai2026-05-29 01:17Update generate_synthetic_density.py naming and validation to be consistent with generate_synthetic_sf.py
- Issue#242DorisMai2026-05-27 21:50GPU memory contention when generating synthetic data with n_jobs>1 on CUDA
- Releasediffuse-semantic-release[bot]2026-05-27 00:43v0.7.0
- Issue#235DorisMai2026-05-16 00:12Dependency conflict betwen sfcalculator-torch and protenix
- Issue#235DorisMai2026-05-16 00:12Dependency conflict betwen sfcalculator-torch and protenix
- Pull request#234DorisMai2026-05-14 23:04
- Pull request#227k-chrispens2026-04-24 00:33
- Issue#37k-chrispens2026-04-16 23:36For ModelWrappers that use Fabric, etc., figure out how to properly handle device
- Issue comment#220coderabbitai[bot]2026-04-13 10:30test(msa): add MSAManager unit tests (#178)
- Issue comment#218coderabbitai[bot]2026-04-11 20:13fix: remap container paths to host paths in job_metadata.json
- Pull request#218Abdelsalam-Abbas2026-04-11 20:12
- Issue comment#217ManjunathByadagi2026-04-11 10:18Add occupancy validation with proper error handling
- Issue comment#217coderabbitai[bot]2026-04-11 07:13Add occupancy validation with proper error handling
- Issue#214marcuscollins2026-04-10 21:00CIF file outputs should maintain the original file(s)' label_seq_id, auth_seq_id numbers and chain letterings
- Issue#213marcuscollins2026-04-10 20:52Evaluation scripts should get the locations of maps or input pdb files used from the results metadata, not from a config file or command line arguments
- Issue#212marcuscollins2026-04-10 19:22Output metadata should be updated to include start and end time from JobResult
- Issue#212marcuscollins2026-04-10 19:22Output metadata should be updated to include start and end time from JobResult
- Issue comment#205coderabbitai[bot]2026-04-09 02:47Mdc/feat add recycling and num steps
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.