[Donor] Supervised gene program deconvolution for single-cell RNA-seq — complements Hotspot Step04
active 2023-08-18 → 2026-05-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 992 days from 2023-08-18 to 2026-05-05. Pushes: 28 total, peak 18 in a day. Pull requests: 10 total, peak 2 in a day. Issues: 23 total, peak 2 in a day. Comments: 34 total, peak 2 in a day. Stars: 114 total, peak 6 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| wallet-maker | 24 | 17 | 2 | 4 |
| Tobiaspk | 20 | 11 | 4 | 4 |
| erflynn | 4 | 0 | 0 | 3 |
| deanslee | 3 | 0 | 0 | 2 |
| russellkune | 3 | 0 | 0 | 3 |
| YuliaInn | 3 | 0 | 0 | 2 |
| sanjayontheweb | 2 | 0 | 0 | 1 |
| Joyjoyjoyc | 2 | 0 | 0 | 1 |
| rah4927 | 2 | 0 | 2 | 0 |
| CorinnaLo | 2 | 0 | 0 | 2 |
| bitcometz | 2 | 0 | 0 | 1 |
| yizhang-zoey | 2 | 0 | 0 | 0 |
| bpkwee | 2 | 0 | 0 | 1 |
| ErikaZ95 | 2 | 0 | 0 | 2 |
| ccruizm | 2 | 0 | 0 | 1 |
| Sandeep-S-K | 1 | 0 | 0 | 0 |
| Thapeachydude | 1 | 0 | 0 | 0 |
| mariemoullet | 1 | 0 | 0 | 0 |
| joshdempster | 1 | 0 | 0 | 0 |
| theheking | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#60wallet-maker2026-01-30 06:06
- Issue comment#38FilippoGas2025-12-24 14:00Number of cores allocation
- Issue comment#47erflynn2025-07-10 22:17factor importance and information scores
- Issue comment#47erflynn2025-07-10 22:13factor importance and information scores
- Issue comment#58erflynn2025-06-04 17:23Selecting number of factors via bulk eigenvalue estimation
- Issue comment#58wallet-maker2025-06-04 17:02Selecting number of factors via bulk eigenvalue estimation
- Issue comment#52Almalvas2025-05-29 18:36spc.est_spectra returns error "AttributeError: 'Series' object has no attribute 'nonzero'"
- Issue#58erflynn2025-05-23 19:36Selecting number of factors via bulk eigenvalue estimation
- Issue#57Thapeachydude2025-04-01 21:07Applicability to cancer data
- Issue#56pikapika5052025-03-25 02:35different overlap resuts
- Issue comment#52TBar1232025-03-14 17:10spc.est_spectra returns error "AttributeError: 'Series' object has no attribute 'nonzero'"
- Issue comment#47bpkwee2025-03-10 11:10factor importance and information scores
- Issue comment#55wallet-maker2025-03-08 21:05Generating Spectra factors for test set
- Issue#55mariemoullet2025-03-02 18:56Generating Spectra factors for test set
- Pull request#54rah49272025-02-10 20:00
- Pull request#54rah49272025-02-10 19:59
- Issue#53sanjayontheweb2025-02-06 19:50Model Assessment/Convergence
- Issue#52halterc2025-02-05 10:19spc.est_spectra returns error "AttributeError: 'Series' object has no attribute 'nonzero'"
- Issue comment#18sanjayontheweb2025-01-30 18:52Monitoring training
- Issue#51Nusob8882025-01-06 11:04Request for paused training
- Issue#50theheking2024-11-28 03:53Epoch error
- Issue comment#45AndiL042024-11-04 18:44Specific factors vary based on global.
- Issue comment#41YuliaInn2024-10-14 16:35Does Spectra accept processed expression matrix as the input?
- Issue comment#41YuliaInn2024-10-14 16:32Does Spectra accept processed expression matrix as the input?
- Issue#49YuliaInn2024-09-05 21:05Cross-species transfer learning
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 114 stars here means stars gained during the window, not the repo's star count.