Plots BAF and depth of variants from given VCF
active 2025-01-20 → 2026-08-04 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 562 days from 2025-01-20 to 2026-08-04. Pushes: 63 total, peak 6 in a day. Pull requests: 23 total, peak 2 in a day. Issues: 13 total, peak 3 in a day. Comments: 89 total, peak 16 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| coderabbitai[bot] | 117 | 0 | 0 | 61 |
| jethror1 | 49 | 6 | 8 | 10 |
| chrispyatt | 42 | 23 | 4 | 5 |
| raymondmiles | 27 | 13 | 2 | 4 |
| cnascim1 | 26 | 10 | 4 | 7 |
| woook | 12 | 2 | 2 | 0 |
| pofuoku | 7 | 2 | 2 | 1 |
| Siiikiiii | 6 | 6 | 0 | 0 |
| mattgarner | 4 | 0 | 1 | 0 |
| Aisha-D | 2 | 0 | 0 | 1 |
| Yu-jinKim | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Releaseraymondmiles2025-12-05 10:39v2.2.0
- Issue#6raymondmiles2025-12-05 10:38Add filtering of variants for BAF plot within given regions
- Issue comment#6raymondmiles2025-12-05 10:38Add filtering of variants for BAF plot within given regions
- Pull request#31mattgarner2025-09-26 15:39
- Pull request#31raymondmiles2025-09-19 14:34
- Issue comment#25raymondmiles2025-09-18 10:58Handle CEN GVCFs
- Issue#30mattgarner2025-09-12 11:54Improve clarity of input parameter documentation
- Releaseraymondmiles2025-09-11 08:11v2.1.0
- Issue comment#29coderabbitai[bot]2025-09-10 10:51Added a check for empty vcf file input
- Issue#27raymondmiles2025-09-02 12:38TSV file generation bug: QUAL filter not applied
- Issue comment#26coderabbitai[bot]2025-08-08 18:47Update to enable eggd_plot_variant_baf to work for DIAS
- Pull request#26raymondmiles2025-08-08 18:47
- Issue#25chrispyatt2025-08-04 14:06Handle CEN GVCFs
- Issue#21jethror12025-07-09 16:13All inputs not listed with explanation in readme
- Issue comment#20coderabbitai[bot]2025-07-03 12:37output empty plot when vcf is empty instead of falling over
- Pull request#20chrispyatt2025-07-03 12:37
- Pull request#19jethror12025-06-25 11:34
- Pull request#18jethror12025-06-17 09:47
- Issue comment#18coderabbitai[bot]2025-06-13 11:32add median coverage lines
- Pull request#17jethror12025-06-05 16:46
- Issue comment#17coderabbitai[bot]2025-06-05 15:06Multiple vcf inputs
- Issue#16chrispyatt2025-06-05 15:04Auto bin size calculation does not work
- Issue#4jethror12025-05-23 15:40Remove setting parameters within functions
- Issue#2jethror12025-05-23 15:40Make genome build an input to remove hardcoded hg19
- Issue#11jethror12025-05-23 15:39Make plots symmetrical
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.