A general purpose Snakemake workflow to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.
active 2023-08-25 → 2026-05-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 986 days from 2023-08-25 to 2026-05-06. Pushes: 74 total, peak 4 in a day. Pull requests: 20 total, peak 5 in a day. Issues: 96 total, peak 11 in a day. Comments: 111 total, peak 9 in a day. Stars: 36 total, peak 6 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| sreichl | 246 | 65 | 8 | 83 |
| bednarsky | 34 | 0 | 6 | 16 |
| hoferand | 18 | 8 | 5 | 5 |
| JakeLehle | 6 | 0 | 1 | 4 |
| summersohot | 3 | 0 | 0 | 3 |
| kvetab | 1 | 0 | 0 | 0 |
| github-actions[bot] | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#95hoferand2026-04-21 08:33Replace pip packages
- Issue comment#93hoferand2026-04-15 11:27Update conda env pins
- Issue comment#89hoferand2026-04-14 06:07Add GH action for pinning conda envs
- Pull request#87hoferand2026-04-06 10:41
- Issue comment#85hoferand2026-04-02 06:28Add GitHub test action
- Pull request#82hoferand2026-03-24 08:23
- Issue comment#81hoferand2026-03-22 15:23Add JSON schema
- Pull request#79hoferand2026-03-22 12:15
- Pull request#80hoferand2026-03-20 11:08
- Issue comment#76sreichl2026-03-16 12:35Apply best practices
- Issue comment#75sreichl2026-03-14 10:12implement Independent Component Analysis (ICA) or Non-negative Matrix Factorization (NMF)
- Issue comment#75bednarsky2026-03-14 10:08implement Independent Component Analysis (ICA) or Non-negative Matrix Factorization (NMF)
- Issue comment#75sreichl2026-03-14 10:05implement Independent Component Analysis (ICA) or Non-negative Matrix Factorization (NMF)
- Issue comment#75bednarsky2026-03-14 09:58implement Independent Component Analysis (ICA)
- Pull request#76hoferand2026-03-13 13:22
- Issue comment#74sreichl2025-09-12 07:48Fix bug: umap not imported but used
- Pull request#74sreichl2025-09-12 07:48
- Releasesreichl2025-07-02 15:00v3.0.3 - Minor fixes
- Issue#72sreichl2025-07-02 14:59Error in plot_umap_connectivity: hammer_bundle operation requires dask and scikit-image.
- Issue#72bednarsky2025-07-02 11:46Error in plot_umap_connectivity: hammer_bundle operation requires dask and scikit-image.
- Releasesreichl2025-06-23 14:22v3.0.2 - Minor fixes & improvements
- Issue#55sreichl2025-06-23 12:23improve interactive plots for numerical metadata
- Pull request#71sreichl2025-06-10 13:57
- Pull request#71bednarsky2025-06-07 16:35
- Issue comment#54sreichl2025-05-09 14:04clustification v1
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 36 stars here means stars gained during the window, not the repo's star count.