Tutorials to learn reading, cleaning and validating case data, and converting line list data to incidence for visualizing epidemic curves.
active 2024-02-08 → 2026-07-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 903 days from 2024-02-08 to 2026-07-29. Pushes: 839 total, peak 37 in a day. Pull requests: 143 total, peak 7 in a day. Issues: 184 total, peak 13 in a day. Comments: 357 total, peak 29 in a day. Stars: 2 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| avallecam | 883 | 257 | 97 | 210 |
| github-actions[bot] | 519 | 438 | 0 | 81 |
| Degoot-AM | 218 | 108 | 19 | 34 |
| Bisaloo | 37 | 13 | 16 | 4 |
| Karim-Mane | 23 | 12 | 2 | 3 |
| joshwlambert | 20 | 2 | 0 | 14 |
| adamkucharski | 14 | 2 | 1 | 9 |
| epiverse-trace-bot | 11 | 7 | 4 | 0 |
| wiessall | 3 | 0 | 2 | 1 |
| CarmenTamayo | 3 | 0 | 0 | 0 |
| yabellini | 2 | 0 | 2 | 0 |
| github-advanced-security[bot] | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#229github-actions[bot]2026-04-07 01:24Update 32 packages
- Pull request#228epiverse-trace-bot2026-03-03 01:29
- Issue comment#75Degoot-AM2026-02-27 11:16homogenize to `library(package)` instead of `library("package")`
- Issue comment#138Degoot-AM2026-02-24 09:57construct a `%>%` connected pipeline when using {cleanepi}
- Issue#216Degoot-AM2026-02-24 09:50add format in scan_data after cleanepi update in CRAN
- Issue comment#226github-actions[bot]2026-02-23 08:47Update cleaning
- Pull request#193Karim-Mane2026-02-22 11:16
- Issue#209Degoot-AM2026-02-13 11:44add comment of potential failure due to firewall
- Issue#208Degoot-AM2026-02-13 11:44update read case data after package update
- Issue comment#167avallecam2026-02-13 10:42review comment to episodes
- Issue comment#167avallecam2026-02-13 10:42review comment to episodes
- Issue comment#98Bisaloo2026-02-12 20:51Do not use `echo = FALSE` or `warning = FALSE` chunk options
- Issue#223avallecam2026-02-12 20:30add challenge for SORMAS
- Issue comment#66Degoot-AM2026-02-12 10:03More examples for reading from database
- Issue comment#219github-actions[bot]2026-02-03 01:26Update 33 packages
- Pull request#219epiverse-trace-bot2026-02-03 01:26
- Pull request#219epiverse-trace-bot2026-02-03 01:26
- Issue comment#215github-actions[bot]2025-10-16 12:12add link to orders argument reprex
- Issue comment#214github-actions[bot]2025-10-16 11:01Enhance subject ID correction instructions
- Pull request#214avallecam2025-10-16 11:01
- Issue comment#163avallecam2025-10-07 11:30Automatic translations
- Pull request#163yabellini2025-10-04 01:10
- Issue#209avallecam2025-09-18 20:51add comment of potential failure due to firewall
- Issue#208avallecam2025-09-18 16:47update read case data after package update
- Issue#205avallecam2025-09-10 09:37update installation page
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 2 stars here means stars gained during the window, not the repo's star count.