Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
active 2023-08-15 → 2026-05-08 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 998 days from 2023-08-15 to 2026-05-08. Pushes: 482 total, peak 18 in a day. Pull requests: 69 total, peak 4 in a day. Issues: 77 total, peak 2 in a day. Comments: 140 total, peak 8 in a day. Stars: 152 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| jordibc | 408 | 298 | 39 | 48 |
| github-actions[bot] | 157 | 157 | 0 | 0 |
| dengzq1234 | 69 | 24 | 12 | 15 |
| jhcepas | 12 | 1 | 3 | 5 |
| Rafiot | 8 | 0 | 0 | 7 |
| yudalang3 | 7 | 0 | 1 | 5 |
| lm-jkominek | 6 | 0 | 0 | 3 |
| harryrichman | 6 | 0 | 2 | 2 |
| terrycojones | 5 | 0 | 0 | 2 |
| Zethson | 5 | 0 | 0 | 4 |
| sirno | 4 | 0 | 0 | 3 |
| ArnaudBelcour | 3 | 0 | 1 | 2 |
| Hemimastix | 3 | 0 | 0 | 2 |
| lenacoll | 3 | 0 | 1 | 0 |
| jolespin | 3 | 0 | 0 | 3 |
| Yogesh1-11 | 3 | 0 | 0 | 3 |
| rtviii | 3 | 0 | 2 | 1 |
| harper357 | 3 | 0 | 0 | 3 |
| metehaansever | 2 | 0 | 0 | 0 |
| lab83bio | 2 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#783Changwanseo2026-05-08 00:10Fix issues when installing ete4 on Windows.
- Issue comment#804xapple2026-03-14 17:24No more arm64 releases in version 4 on conda-forge
- Issue comment#805xosxos2026-03-02 17:46Circular tree behavior has regressed in ete4
- Issue comment#805xosxos2026-03-02 17:20Circular tree behavior has regressed in ete4
- Issue#804xapple2026-01-21 10:09No more arm64 releases in version 4 on conda-forge
- Issue comment#802jordibc2025-12-23 22:26None returned when using Tree.support method for multisupport bootstrap values
- Issue comment#802ammaraziz2025-12-23 22:20None returned when using Tree.support method for multisupport bootstrap values
- Issue#802jordibc2025-12-23 22:17None returned when using Tree.support method for multisupport bootstrap values
- Issue#800terrycojones2025-11-04 19:46Support for Python 3.14?
- Issue#799terrycojones2025-11-04 15:20ete4 Newick parser read_props: local variable 'p1_str' referenced before assignment
- Issue comment#798meereeum2025-09-26 16:56loading GTDB(-tk) trees (quoted_node_names ?)
- Issue comment#798dengzq12342025-09-25 22:48loading GTDB(-tk) trees (quoted_node_names ?)
- Issue#798meereeum2025-09-25 22:20loading GTDB(-tk) trees (quoted_node_names ?)
- Issue#796biofilos2025-09-14 07:20'init from dict data should not use parser' when using EvolTree with newick file (it works in ete3)
- Issue comment#781terrycojones2025-09-05 18:23Replace use of cgi.parse_qs (deprecated in Python 3.13) in ete3 with call to urllib.parse.parse_qs
- Issue#795hmontenegro2025-09-05 13:37`ete4 compare` command line interface is broken
- Issue comment#781jordibc2025-09-04 09:38Replace use of cgi.parse_qs (deprecated in Python 3.13) in ete3 with call to urllib.parse.parse_qs
- Issue comment#780jordibc2025-08-26 10:18ete3 cannot be used with Python 3.13 due to the deprecation of the cgi module
- Issue#780jordibc2025-08-26 10:18ete3 cannot be used with Python 3.13 due to the deprecation of the cgi module
- Issue comment#781ecederstrand2025-08-26 10:07Replace use of cgi.parse_qs (deprecated in Python 3.13) in ete3 with call to urllib.parse.parse_qs
- Issue comment#781jordibc2025-08-26 10:04Replace use of cgi.parse_qs (deprecated in Python 3.13) in ete3 with call to urllib.parse.parse_qs
- Pull request#781jordibc2025-08-26 09:56
- Issue comment#794Rafiot2025-08-20 00:36[Feature] Release a wheel package on PyPi
- Issue comment#794yudalang32025-08-19 23:52[Feature] Release a wheel package on PyPi
- Issue comment#794Rafiot2025-08-19 08:28[Feature] Release a wheel package on PyPi
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 152 stars here means stars gained during the window, not the repo's star count.