Fork of ESM3
Python · active 2025-01-09 → 2026-05-11 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 488 days from 2025-01-09 to 2026-05-11. Pushes: 40 total, peak 6 in a day. Pull requests: 31 total, peak 4 in a day. Issues: 51 total, peak 5 in a day. Comments: 77 total, peak 14 in a day. Stars: 356 total, peak 16 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ebetica | 35 | 2 | 8 | 14 |
| imathur1 | 25 | 12 | 2 | 6 |
| thomas-a-neil | 18 | 8 | 5 | 4 |
| s22chan | 14 | 9 | 3 | 0 |
| santiag0m | 12 | 4 | 3 | 3 |
| gjoliver | 10 | 2 | 3 | 1 |
| cmishra | 9 | 3 | 1 | 2 |
| cursor[bot] | 5 | 0 | 0 | 2 |
| lzygitk7 | 4 | 0 | 0 | 3 |
| lhallee | 4 | 0 | 1 | 2 |
| navotarad | 3 | 0 | 0 | 1 |
| JamesScott-swe | 3 | 0 | 3 | 0 |
| bviggiano | 3 | 0 | 1 | 2 |
| YvonneLU2025 | 3 | 0 | 0 | 1 |
| 123Barry | 3 | 0 | 0 | 3 |
| github-actions[bot] | 3 | 0 | 0 | 3 |
| bosborne | 2 | 0 | 0 | 1 |
| lapsya | 2 | 0 | 1 | 1 |
| zw-SIMM | 2 | 0 | 0 | 1 |
| peiyaoli | 2 | 0 | 0 | 2 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#303ebetica2026-04-10 15:12Torchvision and Torchtext are unused dependencies
- Issue comment#302santiag0m2026-03-17 03:24ESM3 fails to generate target protein domains sequences
- Issue#302santiag0m2026-03-17 03:24ESM3 fails to generate target protein domains sequences
- Issue comment#299thomas-a-neil2026-02-26 02:59Bug in attention mask - currently ESM3 and ESMC pad tokens attend to each other
- Issue comment#299thomas-a-neil2026-02-26 00:24Bug in attention mask - currently ESM3 and ESMC pad tokens attend to each other
- Issue comment#240jonahzoldan2026-02-23 16:24esm c (esmc-300m-2024-12 or esmc-600m-2024-12): AttributeError: property 'cls_token' of 'EsmSequenceTokenizer' object has no setter.
- Pull request#300lhallee2026-02-20 20:27
- Issue#299lhallee2026-02-20 20:21Bug in attention mask - currently ESM3 and ESMC pad tokens attend to each other
- Issue comment#296EgorBulavko2026-02-17 19:28Unable to access models through EvolutionaryScale Forge:
- Pull request#298thomas-a-neil2026-01-26 19:44
- Issue#294jsjung002025-12-19 05:37Performance discrepancy with nan coordinates vs coordinates=None
- Issue comment#224jinlong-abc2025-12-17 13:16AttributeError: 'ESMProteinError' object has no attribute 'hidden_states'
- Issue#292kumarshreshtha2025-12-07 21:09[Bug] API sends all hidden states when asked for only mean hidden state
- Issue comment#291bosborne2025-12-04 20:37"Quickstart for ESM C Open Models" example does not work
- Issue#291bosborne2025-12-04 20:33"Quickstart for ESM C Open Models" example does not work
- Issue#287Ento0n2025-11-05 09:04ESMProtein.from_pdb() ignores HETATOM
- Issue comment#285pdxooo2025-11-03 01:47An error occurred when running Quickstart for ESM3-open. replace() argument 2 must be str, not None
- Issue#252imathur12025-10-29 21:42Mapping sequence logit to amino acid identity for ESM3 and ESMC
- Issue comment#252imathur12025-10-29 21:42Mapping sequence logit to amino acid identity for ESM3 and ESMC
- Issue comment#241imathur12025-10-29 20:22Why does the embedding generated by ESMC have two more tokens than the sequence length?
- Issue comment#265imathur12025-10-22 20:55Since ESM works well with newest transformers versions, can we update pyrproject.toml?
- Issue#265imathur12025-10-22 20:55Since ESM works well with newest transformers versions, can we update pyrproject.toml?
- Issue comment#265imathur12025-10-22 16:23Since ESM works well with newest transformers versions, can we update pyrproject.toml?
- Issue#281navotarad2025-10-21 21:46Mismatch between logits dimensions and vocab size in ESM C model
- Issue comment#281navotarad2025-10-21 21:46Mismatch between logits dimensions and vocab size in ESM C model
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 356 stars here means stars gained during the window, not the repo's star count.