Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
active 2023-08-18 → 2026-03-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 936 days from 2023-08-18 to 2026-03-10. Pushes: 95 total, peak 14 in a day. Pull requests: 30 total, peak 3 in a day. Issues: 30 total, peak 3 in a day. Comments: 102 total, peak 11 in a day. Stars: 26 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| fmalmeida | 215 | 95 | 30 | 68 |
| JavariaAshraf | 21 | 0 | 0 | 18 |
| Michaelijesse | 15 | 0 | 0 | 9 |
| Meeenakshipari | 4 | 0 | 0 | 3 |
| josefdiaz | 3 | 0 | 0 | 3 |
| mladen5000 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#138fmalmeida2026-01-22 15:44
- Pull request#138fmalmeida2026-01-22 15:44
- Issue comment#137fmalmeida2025-11-26 02:55Release v3.4.3
- Issue comment#137fmalmeida2025-11-26 02:40Release v3.4.3
- Issue#135fmalmeida2025-07-09 19:31add new tool: abritmar
- Issue#134fmalmeida2025-04-24 14:21New tool argNorm
- Issue comment#129fmalmeida2025-03-29 16:02MLST, VICTORS etc show process failures. How to fix it?
- Issue#129fmalmeida2025-03-29 16:01MLST, VICTORS etc show process failures. How to fix it?
- Issue comment#131fmalmeida2025-03-29 16:01BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue#131fmalmeida2025-03-29 16:01BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Pull request#133fmalmeida2025-03-29 15:59
- Pull request#133fmalmeida2025-03-28 18:56
- Issue comment#132fmalmeida2025-03-11 22:02Fix prohibited characters in database
- Issue comment#131fmalmeida2025-02-14 10:52BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131JavariaAshraf2025-02-14 10:35BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131fmalmeida2025-02-14 07:40BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131JavariaAshraf2025-02-14 06:58BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Pull request#132fmalmeida2025-02-13 16:40
- Issue comment#131fmalmeida2025-02-12 10:32BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131fmalmeida2025-02-12 08:04BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131fmalmeida2025-02-12 08:02BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131JavariaAshraf2025-02-12 05:52BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131fmalmeida2025-02-11 13:25BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131fmalmeida2025-02-11 07:03BACANNOT:SUMMARY, KeyError: 'tmRNA'
- Issue comment#131JavariaAshraf2025-02-11 06:56BACANNOT:SUMMARY, KeyError: 'tmRNA'
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 26 stars here means stars gained during the window, not the repo's star count.