Devel repository for bsseq
active 2023-08-17 → 2026-02-06 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 905 days from 2023-08-17 to 2026-02-06. Pushes: 20 total, peak 3 in a day. Pull requests: 12 total, peak 3 in a day. Issues: 11 total, peak 2 in a day. Comments: 53 total, peak 8 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| PeteHaitch | 38 | 2 | 2 | 28 |
| kasperdanielhansen | 26 | 18 | 2 | 6 |
| Rfriedmancolumbia | 7 | 0 | 0 | 7 |
| yixuan-chen-elisa | 7 | 0 | 7 | 0 |
| demis001 | 5 | 0 | 0 | 5 |
| desmodus1984 | 4 | 0 | 0 | 3 |
| Lxia626 | 2 | 0 | 0 | 1 |
| JonathanUrbach | 2 | 0 | 0 | 1 |
| hpages | 1 | 0 | 0 | 0 |
| SrenBlikdal | 1 | 0 | 1 | 0 |
| wassimsalam01 | 1 | 0 | 0 | 1 |
| SmirnygaTotoshka | 1 | 0 | 0 | 0 |
| RicardoMartins-Ferreira | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Pull request#155SrenBlikdal2026-02-06 21:59
- Pull request#150kasperdanielhansen2025-09-05 14:30
- Issue comment#151Lxia6262025-07-30 05:37Questions related to BSmooth error: encountered errors: 2 of 2 smoothing tasks failed.
- Issue comment#151PeteHaitch2025-07-29 21:06Questions related to BSmooth error: encountered errors: 2 of 2 smoothing tasks failed.
- Issue#151Lxia6262025-07-29 13:29Questions related to BSmooth error: encountered errors: 2 of 2 smoothing tasks failed.
- Pull request#150PeteHaitch2025-07-10 06:21
- Issue comment#149kasperdanielhansen2025-07-03 22:09Combine example from the vignette fails with "Error in combineList(list(x, y)) : object 'ans_coef' not found"
- Issue comment#149JonathanUrbach2025-07-02 23:09Combine example from the vignette fails with "Error in combineList(list(x, y)) : object 'ans_coef' not found"
- Issue comment#149PeteHaitch2025-07-02 22:52Combine example from the vignette fails with "Error in combineList(list(x, y)) : object 'ans_coef' not found"
- Issue#149PeteHaitch2025-07-02 22:52Combine example from the vignette fails with "Error in combineList(list(x, y)) : object 'ans_coef' not found"
- Issue#149JonathanUrbach2025-07-02 20:45Combine example from the vignette fails with "Error in combineList(list(x, y)) : object 'ans_coef' not found"
- Issue#148SmirnygaTotoshka2025-06-13 21:24bedMethyl file read
- Issue comment#147PeteHaitch2025-05-28 00:13group1.mean and group2.mean do not fit with mean meth values per DMR (in-script)
- Issue comment#147RicardoMartins-Ferreira2025-05-27 11:35group1.mean and group2.mean do not fit with mean meth values per DMR (in-script)
- Issue comment#147PeteHaitch2025-05-25 22:06group1.mean and group2.mean do not fit with mean meth values per DMR (in-script)
- Issue comment#143PeteHaitch2024-12-16 04:19Switch to the latest tatami interface for the M/Cov validity check.
- Pull request#143PeteHaitch2024-12-16 04:13
- Issue comment#139PeteHaitch2024-10-07 03:20geneTrack in plotRegion
- Issue comment#142PeteHaitch2024-10-07 03:14read.bismark doesn't finish with new R.
- Issue#142desmodus19842024-09-23 22:42read.bismark doesn't finish with new R.
- Issue comment#140PeteHaitch2024-08-30 21:36Bsmooth()
- Issue comment#140PeteHaitch2024-08-29 01:31Bsmooth()
- Issue#139PeteHaitch2024-08-06 21:30geneTrack in plotRegion
- Issue comment#139PeteHaitch2024-08-06 21:28geneTrack in plotRegion
- Issue comment#136PeteHaitch2024-04-15 03:59No output from read.bismark with bismark cov.files
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.