place for documentation on how to run pipelines and guidelines for analysis
active 2024-05-22 → 2025-08-29 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 465 days from 2024-05-22 to 2025-08-29. Pushes: 124 total, peak 17 in a day. Pull requests: 19 total, peak 6 in a day. Issues: 16 total, peak 3 in a day. Comments: 14 total, peak 3 in a day. Stars: 0 total, peak 0 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| lpantano | 79 | 45 | 10 | 6 |
| github-actions[bot] | 44 | 44 | 0 | 0 |
| Gammerdinger | 40 | 32 | 6 | 2 |
| abartlett004 | 6 | 3 | 1 | 2 |
| ZhuZhuoHSPH | 6 | 0 | 0 | 3 |
| mistrm82 | 1 | 0 | 1 | 0 |
| lijin0303 | 1 | 0 | 0 | 1 |
| upendrabhattarai | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#22lpantano2025-05-22 13:47
- Issue#16lpantano2025-03-11 17:48Add docs on how to transfer dat
- Issue comment#14lpantano2025-03-10 22:07Baysor: cell segmentation
- Issue comment#14lpantano2025-03-10 21:55Baysor: cell segmentation
- Issue#12lpantano2025-03-06 19:45latest version of mouse genome to check
- Issue#17lpantano2025-03-06 19:45chipseq base-human-mouse in PROD
- Issue#21lpantano2025-03-06 16:05FAISS env in FAS for scGPT
- Issue comment#12abartlett0042025-03-05 16:41latest version of mouse genome to check
- Issue#20lpantano2025-03-04 21:30Table with all PASS mutations in all genes
- Issue comment#17abartlett0042025-03-04 18:29chipseq base-human-mouse in PROD
- Issue#19lpantano2025-03-04 14:42install grafify in o2
- Pull request#18lpantano2025-02-28 20:05
- Pull request#11lpantano2025-02-28 19:46
- Issue#19lpantano2025-02-27 21:43install grafify in o2
- Pull request#18lpantano2025-02-26 15:01
- Issue#17lpantano2025-02-25 14:44Run chipseq in PROD with test data removing index
- Issue#16lpantano2025-02-24 16:10Add docs on how to transfer dat
- Issue#15lpantano2025-02-20 18:40https://github.com/prabhakarlab/Banksy
- Issue#14lpantano2025-02-20 18:40Baysor: cell segmentation
- Issue#12lpantano2025-02-20 18:39latest version of mouse genome to check
- Pull request#11Gammerdinger2025-02-12 22:20
- Pull request#9lpantano2025-02-12 22:19
- Pull request#9Gammerdinger2025-02-12 22:19
- Pull request#10Gammerdinger2025-02-12 22:18
- Issue comment#7lpantano2025-02-12 22:16wrong code to deploy base project
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.