Tools for improving the sensitivity and specificity of genome alignments
active 2023-08-15 → 2025-08-26 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 743 days from 2023-08-15 to 2025-08-26. Pushes: 0 total, peak 0 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 4 total, peak 2 in a day. Comments: 20 total, peak 4 in a day. Stars: 10 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| MichaelHiller | 7 | 0 | 0 | 7 |
| ebioman | 3 | 0 | 0 | 3 |
| sqwwww | 3 | 0 | 0 | 2 |
| 981Hao | 3 | 0 | 0 | 2 |
| shuifeng1988 | 2 | 0 | 0 | 2 |
| osipovarev | 2 | 0 | 0 | 2 |
| plattsad | 1 | 0 | 0 | 0 |
| liangssdd | 1 | 0 | 0 | 1 |
| YouQing06 | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue#27yaoruoxuan2025-07-24 10:16RepeatFiller running
- Issue comment#22liangssdd2024-12-25 13:33Chain after RepeatFiller with wrong cordinates
- Issue comment#26YouQing062024-08-27 02:37collect2: error: ld returned 1 exit status
- Issue comment#22MichaelHiller2024-03-31 17:58Chain after RepeatFiller with wrong cordinates
- Issue comment#21MichaelHiller2024-03-31 17:58RepeatFiller.py output .chain file reports error when used as input in other chain file programs
- Issue comment#21shuifeng19882024-03-29 11:43RepeatFiller.py output .chain file reports error when used as input in other chain file programs
- Issue comment#22shuifeng19882024-03-29 04:03Chain after RepeatFiller with wrong cordinates
- Issue comment#25MichaelHiller2024-01-06 17:56Update axtChain
- Issue comment#24981Hao2023-12-21 12:45What the difference between GenomeAlignmentTools and make_lastz_chains
- Issue#25plattsad2023-12-21 12:20Update axtChain
- Issue comment#24MichaelHiller2023-12-21 08:32What the difference between GenomeAlignmentTools and make_lastz_chains
- Issue comment#24981Hao2023-12-21 08:18What the difference between GenomeAlignmentTools and make_lastz_chains
- Issue#24981Hao2023-12-21 08:12What the difference between GenomeAlignmentTools and make_lastz_chains
- Issue comment#23sqwwww2023-10-14 09:43rerun from chainSort
- Issue comment#23MichaelHiller2023-10-14 09:41rerun from chainSort
- Issue comment#23sqwwww2023-10-14 09:37rerun from chainSort
- Issue comment#23MichaelHiller2023-10-14 09:23rerun from chainSort
- Issue#23sqwwww2023-10-14 09:11rerun from chainSort
- Issue comment#22ebioman2023-09-13 06:18Chain after RepeatFiller with wrong cordinates
- Issue comment#22ebioman2023-09-13 05:54Chain after RepeatFiller with wrong cordinates
- Issue comment#21osipovarev2023-09-06 17:49RepeatFiller.py output .chain file reports error when used as input in other chain file programs
- Issue comment#22osipovarev2023-09-06 17:43Chain after RepeatFiller with wrong cordinates
- Issue comment#22ebioman2023-08-15 13:39Chain after RepeatFiller with wrong cordinates
- Issue comment#22MichaelHiller2023-08-15 08:00Chain after RepeatFiller with wrong cordinates
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 10 stars here means stars gained during the window, not the repo's star count.