hra-workflows: HRA workflows for processing experimental data via the DCTA
active 2023-08-17 → 2026-06-23 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1042 days from 2023-08-17 to 2026-06-23. Pushes: 138 total, peak 9 in a day. Pull requests: 31 total, peak 4 in a day. Issues: 18 total, peak 3 in a day. Comments: 12 total, peak 3 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| axdanbol | 98 | 74 | 13 | 1 |
| vickydaiya | 49 | 37 | 9 | 1 |
| bherr2 | 47 | 19 | 4 | 6 |
| HumaidIlyas | 14 | 8 | 3 | 2 |
| andreasbueckle | 5 | 0 | 0 | 1 |
| BeverlyPeng | 2 | 0 | 1 | 1 |
| emquardokus | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#39bherr22025-12-05 19:32TODOs in support of QC for HRApop paper
- Pull request#38HumaidIlyas2025-10-28 15:04
- Issue#33bherr22025-10-19 12:18Write top genes to a separate file, rather than in the input h5ad
- Issue#32bherr22025-10-05 20:06Write annotations.csv.gz in the crosswalking container
- Issue#33bherr22025-10-05 18:44Write top genes to a separate file, rather than in the input h5ad
- Issue#32bherr22025-10-05 18:41Write annotations.csv.gz in the crosswalking container
- Pull request#30bherr22025-10-03 14:20
- Issue#31HumaidIlyas2025-09-30 23:46Panhuman Azimuth Latest Update Issue
- Pull request#30HumaidIlyas2025-09-30 23:37
- Issue comment#24bherr22025-09-03 20:06Saving the annotated matrix
- Pull request#24bherr22025-09-03 20:06
- Pull request#28HumaidIlyas2025-09-03 19:41
- Issue#19bherr22025-08-28 15:27Check popV vs Azimuth and CellTypist annotations for heart dataset
- Issue#27bherr22025-08-28 15:25Compress annotations.csv with gzip when computing it
- Issue comment#26HumaidIlyas2025-08-10 20:16Update and test the new pan-human-azimuth component in the underlying panhumanpy library.
- Issue comment#24HumaidIlyas2025-07-30 15:32Saving the annotated matrix
- Issue comment#24bherr22025-07-29 19:59Saving the annotated matrix
- Issue#23bherr22025-07-03 13:22Add annotated_matrix to final output
- Pull request#21bherr22025-06-30 20:04
- Issue comment#21BeverlyPeng2025-06-28 00:35Adding frmatch to cell type annotation workflow
- Pull request#21BeverlyPeng2025-06-27 05:53
- Pull request#20axdanbol2024-10-02 18:39
- Pull request#20axdanbol2024-10-02 18:12
- Issue comment#19andreasbueckle2024-09-06 20:26Check popV vs Azimuth and CellTypist annotations for heart dataset
- Issue comment#18bherr22024-09-06 20:24Document hepatocytes in heartdatasets from popV
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.