Identifies genes that have emerged de novo (from non-coding DNA).
active 2024-01-21 → 2026-03-18 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 788 days from 2024-01-21 to 2026-03-18. Pushes: 11 total, peak 3 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 10 total, peak 1 in a day. Comments: 13 total, peak 4 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Proginski | 18 | 10 | 0 | 6 |
| MargauxAubel | 5 | 0 | 0 | 2 |
| Galaxy-228 | 3 | 0 | 0 | 1 |
| asifahmed23 | 3 | 0 | 0 | 3 |
| vinitamehlawat | 1 | 0 | 0 | 0 |
| Elmirareza | 1 | 0 | 0 | 0 |
| ChloeQuignot | 1 | 0 | 0 | 1 |
| zhouxp9709 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#8zhouxp97092026-01-30 01:12Skip the NR database blast
- Issue#6vinitamehlawat2025-10-03 01:38ERROR ~ Error executing process > 'DENSE_WF:DENSE:TAXDUMP'
- Issue#5Elmirareza2025-07-13 17:57DENSE pipeline fails at genEra step – missing Diamond .bout file
- Issue comment#4asifahmed232025-07-11 17:00genEra could not find the raw "ncbi_lineages" file
- Issue comment#4Proginski2025-06-25 07:02genEra could not find the raw "ncbi_lineages" file
- Issue comment#4asifahmed232025-06-24 09:45genEra could not find the raw "ncbi_lineages" file
- Issue comment#4Proginski2025-06-23 07:06genEra could not find the raw "ncbi_lineages" file
- Issue comment#4asifahmed232025-06-22 14:56genEra could not find the raw "ncbi_lineages" file
- Issue comment#4Proginski2025-06-20 13:30genEra could not find the raw "ncbi_lineages" file
- Issue#3MargauxAubel2025-02-21 10:36Diamond error: Illegal instruction (core dumped)
- Issue comment#3MargauxAubel2025-01-14 15:46Diamond error: Illegal instruction (core dumped)
- Issue comment#3Proginski2025-01-14 15:13Diamond error: Illegal instruction (core dumped)
- Issue#3MargauxAubel2025-01-14 15:00Diamond error: Illegal instruction (core dumped)
- Issue comment#3MargauxAubel2025-01-14 14:58Diamond error: Illegal instruction (core dumped)
- Issue comment#3Proginski2025-01-14 13:29Diamond error: Illegal instruction (core dumped)
- Issue#3MargauxAubel2024-11-22 15:01Diamond error: Illegal instruction (core dumped)
- Issue#2Proginski2024-10-15 07:43Failed to pull singularity image
- Issue comment#2Galaxy-2282024-10-14 06:18Failed to pull singularity image
- Issue comment#2Proginski2024-10-11 08:18Failed to pull singularity image
- Issue#2Galaxy-2282024-10-11 07:33Failed to pull singularity image
- Issue#1Proginski2024-09-30 07:16The DENSE web server is not functioning properly.
- Issue comment#1ChloeQuignot2024-09-30 05:41The DENSE web server is not functioning properly.
- Issue#1Galaxy-2282024-09-19 14:01The DENSE web server is not functioning properly.
- ReleaseProginski2024-09-02 09:39v1.0.8
- ReleaseProginski2024-07-16 09:08v1.0.7
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.