Interpretative standards for AMR genotypes
active 2024-04-26 → 2025-06-04 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 405 days from 2024-04-26 to 2025-06-04. Pushes: 3 total, peak 1 in a day. Pull requests: 3 total, peak 2 in a day. Issues: 8 total, peak 4 in a day. Comments: 2 total, peak 1 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| jhawkey | 11 | 2 | 2 | 1 |
| rasmusmarvig | 2 | 0 | 0 | 1 |
| katholt | 1 | 1 | 0 | 0 |
| leosanbu | 1 | 0 | 0 | 0 |
| lcerdeira | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#14lcerdeira2025-06-04 20:08
- Issue#13jhawkey2025-06-04 09:21summarised genome report - separate wildtype and non wildtype markers into two columns
- Issue#4jhawkey2025-06-03 00:03I get "0 hits matched a rule " both when I tried on AMRrules/tests/data/input/test_ecoli_genome.tsv and 100 local P. aeruginosa genomes.
- Pull request#12jhawkey2025-06-03 00:01
- Pull request#12jhawkey2025-06-03 00:01
- Issue#11leosanbu2025-06-02 10:39defined rules not found for N. gonorrhoeae
- Issue#9jhawkey2025-06-02 01:06download refgene hierarchy on first use only
- Issue#8jhawkey2025-06-02 00:25add a check for organisms where no rules exist
- Issue#7jhawkey2025-06-02 00:05genome summary report needs to deal with genes where no rule is applied
- Issue#6jhawkey2025-06-01 23:59implement checking for rules matching hmm accessions when other ids fail
- Issue comment#4jhawkey2025-06-01 03:01I get "0 hits matched a rule " both when I tried on AMRrules/tests/data/input/test_ecoli_genome.tsv and 100 local P. aeruginosa genomes.
- Issue comment#4rasmusmarvig2025-05-26 20:13I get "0 hits matched a rule " both when I tried on AMRrules/tests/data/input/test_ecoli_genome.tsv and 100 local P. aeruginosa genomes.
- Issue#4rasmusmarvig2025-05-26 07:47I get "0 hits matched a rule " both when I tried on AMRrules/tests/data/input/test_ecoli_genome.tsv and 100 local P. aeruginosa genomes.
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.