Skip to content

jlanej/long_read_visualization

View on GitHub ↗Related repositories →

Methods and scripts to assist with visualization of long read data

active 2026-03-182026-03-27 (UTC)

Complete coverage26,569 / 26,569 hourly files (100%) · 2 absent upstream2023-08-152026-08-26 (UTC)
Events
236
Pushes
142
Pull requests
40
Issues
7
Stars
0
Forks
0

Activity over time

Daily event counts in the loaded window

Line chart, 10 days from 2026-03-18 to 2026-03-27. Pushes: 142 total, peak 23 in a day. Pull requests: 40 total, peak 15 in a day. Issues: 7 total, peak 5 in a day. Comments: 16 total, peak 7 in a day. Stars: 0 total, peak 0 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
Copilot12376407
jlanej523509
github-actions[bot]313100

Recent activity

Latest issues, pull requests and releases

  • Pull request#98Copilot2026-03-27 21:08
  • Issue#85jlanej2026-03-26 18:13
    [Phase 1] Achieve Core Feature Parity: Visualization Accuracy and Robust Genomics Review
  • Issue#87jlanej2026-03-26 17:31
    [Phase 3] Modern UI & Interactivity: Mouse Navigation, Base View, Tooltips, and Coverage
  • Pull request#83Copilot2026-03-26 02:24
  • Pull request#83Copilot2026-03-26 02:24
  • Pull request#82Copilot2026-03-26 01:39
  • Pull request#82Copilot2026-03-26 01:39
  • Issue comment#71Copilot2026-03-25 14:33
    Add Rust CI/CD pipeline, wire up all GUI components, and TSV config support
  • Pull request#68Copilot2026-03-25 02:48
  • Issue#60jlanej2026-03-25 02:39
    [Port][4] Render interactive multi-panel pileups w/ HP color, indel filtering, squish toggle
  • Issue#59jlanej2026-03-25 02:16
    [Port][3] CIGAR-aware reference↔haplotype coordinate translation module
  • Issue#59jlanej2026-03-25 02:16
    [Port][3] CIGAR-aware reference↔haplotype coordinate translation module
  • Pull request#65Copilot2026-03-25 02:13
  • Pull request#65Copilot2026-03-25 01:42
  • Issue#58jlanej2026-03-25 01:42
    [Port][2] Native genomic file reading: BAM/CRAM + FASTA via noodles
  • Issue#58jlanej2026-03-25 01:42
    [Port][2] Native genomic file reading: BAM/CRAM + FASTA via noodles
  • Issue comment#54jlanej2026-03-24 18:13
    Revert PR #53 (hap panel nav lock) + post mortem + correct display toggles
  • Pull request#53Copilot2026-03-24 01:07
  • Issue comment#52Copilot2026-03-24 00:12
    Fix toy dataset read-track artifacts causing IGV 416 failures and harden toy dataset generation
  • Pull request#50Copilot2026-03-23 21:17
  • Pull request#48Copilot2026-03-22 22:57
  • Pull request#48Copilot2026-03-22 22:57
  • Pull request#48Copilot2026-03-22 22:57
  • Pull request#47Copilot2026-03-22 22:25
  • Issue comment#47jlanej2026-03-22 21:37
    docs: document --cram-ref option, add T2T-CHM13 v2.0 reference links, and add chm13v2.0_maskedY_rCRS genome download option

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 0 stars here means stars gained during the window, not the repo's star count.