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Accelerated Bayesian inference of population size history from whole genome data.

active 2024-03-262026-04-07 (UTC)

Complete coverage26,376 / 26,376 hourly files (100%) · 2 absent upstream2023-08-152026-08-17 (UTC)
Events
164
Pushes
74
Pull requests
0
Issues
26
Stars
24
Forks
3

Activity over time

Daily event counts in the loaded window

Line chart, 743 days from 2024-03-26 to 2026-04-07. Pushes: 74 total, peak 5 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 26 total, peak 4 in a day. Comments: 28 total, peak 7 in a day. Stars: 24 total, peak 3 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
terhorst9674012
hyanwong11005
sagitaninta6004
percyfal2001
AprilYUZhang2001
huaixiaolu2002
LeebanY1000
jguhlin1000
mufernando1000
willright281000
zhanxiangzong1000
Shaileshdesai761001
Yung-Chien1000

Recent activity

Latest issues, pull requests and releases

  • Issue#35mufernando2026-03-31 23:18
    Masking uncalled regions
  • Issue comment#28Shaileshdesai762026-01-15 14:42
    Question about input VCF file
  • Issue comment#34terhorst2025-12-17 16:09
    LD regularization missing
  • Issue#31Yung-Chien2025-11-13 08:37
    XlaRuntimeError: FAILED_PRECONDITION: DNN library initialization failed
  • Issue comment#22terhorst2025-09-29 20:14
    phlash.psmcfa error
  • Issue comment#23sagitaninta2025-09-29 19:05
    Getting requirements to build wheel did not run successfully
  • Issue#23sagitaninta2025-09-29 19:04
    Getting requirements to build wheel did not run successfully
  • Issue comment#22sagitaninta2025-09-29 18:52
    phlash.psmcfa error
  • Issue comment#23sagitaninta2025-09-29 14:27
    Getting requirements to build wheel did not run successfully
  • Issue comment#23terhorst2025-09-29 13:57
    Getting requirements to build wheel did not run successfully
  • Issue comment#23sagitaninta2025-09-29 13:32
    Getting requirements to build wheel did not run successfully
  • Issue comment#23terhorst2025-09-29 13:13
    Getting requirements to build wheel did not run successfully
  • Issue#24sagitaninta2025-09-29 05:11
    phlash gpu goes idle for hours
  • Issue#22willright282025-09-28 02:39
    phlash.psmcfa error
  • Issue#19terhorst2025-09-19 15:31
    Fit Parameters and JAX GPU Errors!!!!
  • Issue#21terhorst2025-09-19 15:31
    AssertionError in gpu.py
  • Issue#21terhorst2025-09-19 15:30
    AssertionError in gpu.py
  • Issue#20terhorst2025-09-19 15:16
    Chunk size is ignored
  • Issue#16jguhlin2025-09-18 06:47
    Assertion fail tips?
  • Releaseterhorst2025-09-17 13:57
    v1.0.6
  • Issue comment#13huaixiaolu2025-09-17 07:57
    PyPI package version outdated causing dependency errors
  • Issue comment#13huaixiaolu2025-09-16 14:24
    PyPI package version outdated causing dependency errors
  • Issue#13zhanxiangzong2025-09-16 10:20
    PyPI package version outdated causing dependency errors
  • Issue comment#11terhorst2025-07-21 19:09
    pip install pulls in obsolete dependency dinopy
  • Issue comment#11percyfal2025-07-21 18:22
    pip install pulls in obsolete dependency dinopy

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 24 stars here means stars gained during the window, not the repo's star count.