Toolkit for processing sequences in FASTA/Q formats
active 2023-08-15 → 2026-06-30 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1051 days from 2023-08-15 to 2026-06-30. Pushes: 3 total, peak 2 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 13 total, peak 1 in a day. Comments: 12 total, peak 1 in a day. Stars: 182 total, peak 3 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| lh3 | 8 | 3 | 0 | 3 |
| xiekunwhy | 4 | 0 | 0 | 2 |
| keecarter | 2 | 0 | 0 | 1 |
| silvia1234567890 | 2 | 0 | 0 | 0 |
| shenwei356 | 2 | 0 | 0 | 2 |
| jetrz | 1 | 0 | 0 | 1 |
| malonge | 1 | 0 | 0 | 1 |
| mejasmi | 1 | 0 | 0 | 0 |
| fgvieira | 1 | 0 | 0 | 0 |
| Harun484 | 1 | 0 | 0 | 1 |
| aupadrasta | 1 | 0 | 0 | 0 |
| ElDeveloper | 1 | 0 | 0 | 0 |
| GilChrist19 | 1 | 0 | 0 | 0 |
| ua-micro-cha | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#224xiekunwhy2026-01-03 04:34Segmentation fault (core dumped) when split very large fastq.gz
- Issue comment#224xiekunwhy2026-01-01 10:32Segmentation fault (core dumped) when split very large fastq.gz
- Issue comment#225lh32025-09-29 12:13seqtk downsampling breaks when the downsampling rate is high precision float
- Issue#225mejasmi2025-09-29 08:44seqtk downsampling breaks when the downsampling rate is high precision float
- Issue#224xiekunwhy2025-09-16 14:51Segmentation fault (core dumped) when split very large fastq.gz
- Issue comment#185rodtheo2025-07-18 18:52seqtk hrun bin size
- Releaselh32025-06-01 19:25seqtk-1.5 (r133)
- Issue#223xiekunwhy2025-05-31 12:03released v1.4 subseq return nothing, but v1.4-r132-dirty works well.
- Issue#221GilChrist192025-05-02 19:00`seqtk sample` Long-Form Arguments
- Issue comment#218lh32024-10-31 23:33Questions on telomere detection function
- Issue#218lh32024-10-31 23:33Questions on telomere detection function
- Issue comment#218jetrz2024-10-25 03:36Questions on telomere detection function
- Issue#217ElDeveloper2024-10-04 17:29seqtk sample ignores interleaved reads
- Issue comment#158malonge2024-09-06 00:16Seqtk sample ignores random seed
- Issue comment#216lh32024-08-28 04:12zip, outfile
- Issue#216lh32024-08-28 04:12zip, outfile
- Issue comment#214shenwei3562024-05-26 09:11Error
- Issue#214aupadrasta2024-05-26 09:00Error
- Issue comment#209keecarter2024-03-23 18:59converting fasta to fastq
- Issue comment#209shenwei3562024-03-22 07:45converting fasta to fastq
- Issue#209keecarter2024-03-22 03:13converting fasta to fastq
- Issue#207ua-micro-cha2024-02-19 04:07DNS Resolution Warning with Singularity Container
- Issue#203silvia12345678902023-10-05 11:39Seqtk to count sequences same SeqID
- Issue#203silvia12345678902023-09-14 10:30Seqtk to count sequences same SeqID
- Issue#162fgvieira2023-08-23 13:28subsample reads from an interleaved fastq file
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 182 stars here means stars gained during the window, not the repo's star count.