An algorithm for clustering metagenomic sequences.
Python · active 2023-08-15 → 2026-03-10 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 939 days from 2023-08-15 to 2026-03-10. Pushes: 14 total, peak 4 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 13 total, peak 2 in a day. Comments: 27 total, peak 4 in a day. Stars: 16 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| liu-congcong | 25 | 14 | 0 | 11 |
| guangingmai | 9 | 0 | 0 | 3 |
| jolespin | 7 | 0 | 0 | 6 |
| Paupiera | 6 | 0 | 0 | 3 |
| MuhtashimRafiqChy | 3 | 0 | 0 | 2 |
| LiiiiLi | 2 | 0 | 0 | 2 |
| danpal96 | 1 | 0 | 0 | 0 |
| danieldavilaaleman | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Releaseliu-congcong2025-12-12 03:30MetaDecoder v1.2.2
- Releaseliu-congcong2025-04-06 06:11MetaDecoder v1.2.1
- Issue#21danpal962025-04-03 20:34wrong commit for release v1.2.0
- Issue#20guangingmai2025-04-01 01:05Does the cluster module use single core to run?
- Issue#20guangingmai2025-03-30 08:51Does the cluster module use single core to run?
- Issue#19guangingmai2025-03-30 06:43ConvergenceWarning: Best performing initialization did not converge
- Issue comment#19guangingmai2025-03-30 06:43ConvergenceWarning: Best performing initialization did not converge
- Issue comment#19liu-congcong2025-03-29 15:06ConvergenceWarning: Best performing initialization did not converge
- Issue comment#19guangingmai2025-03-29 08:04ConvergenceWarning: Best performing initialization did not converge
- Issue#19guangingmai2025-03-07 06:12ConvergenceWarning: Best performing initialization did not converge
- Issue#18guangingmai2025-03-07 06:03OpenBLAS warning
- Issue comment#18guangingmai2025-03-05 00:56OpenBLAS warning
- Issue comment#17liu-congcong2025-02-26 02:58metadecoder.seed is not readable
- Releaseliu-congcong2025-02-26 02:49MetaDecoder v1.2.0
- Issue comment#18liu-congcong2025-02-26 00:49OpenBLAS warning
- Issue comment#17liu-congcong2025-02-26 00:45metadecoder.seed is not readable
- Issue comment#17MuhtashimRafiqChy2025-02-24 06:49metadecoder.seed is not readable
- Issue#18guangingmai2025-02-19 05:51OpenBLAS warning
- Issue comment#16MuhtashimRafiqChy2025-02-13 17:00Using coverage files from CoverM for the cluster module
- Issue comment#10liu-congcong2025-02-13 12:03Adding BAM usage for Metadecoder coverage calculation ?
- Issue comment#16liu-congcong2025-02-13 11:52Using coverage files from CoverM for the cluster module
- Issue comment#17liu-congcong2025-02-13 11:44metadecoder.seed is not readable
- Issue#17danieldavilaaleman2025-02-12 17:09metadecoder.seed is not readable
- Issue#16MuhtashimRafiqChy2025-02-07 13:53Using coverage files from CoverM for the cluster module
- Issue comment#10jolespin2024-12-10 14:56Adding BAM usage for Metadecoder coverage calculation ?
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 16 stars here means stars gained during the window, not the repo's star count.