An open-source software package to power microbial genomic databases
active 2024-08-27 → 2026-08-28 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 732 days from 2024-08-27 to 2026-08-28. Pushes: 9,164 total, peak 78 in a day. Pull requests: 3,259 total, peak 36 in a day. Issues: 1,385 total, peak 39 in a day. Comments: 6,816 total, peak 97 in a day. Stars: 39 total, peak 9 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| anna-parker | 5.6K | 2.4K | 560 | 1.3K |
| theosanderson | 4.9K | 1.4K | 623 | 1.5K |
| corneliusroemer | 4.1K | 1.1K | 466 | 1.2K |
| fhennig | 3.1K | 1.4K | 238 | 906 |
| chaoran-chen | 1.8K | 250 | 156 | 683 |
| dependabot[bot] | 1.5K | 301 | 953 | 242 |
| github-actions[bot] | 1.2K | 1.2K | 0 | 4 |
| fengelniederhammer | 983 | 292 | 131 | 321 |
| claude[bot] | 322 | 18 | 39 | 170 |
| maverbiest | 288 | 235 | 7 | 23 |
| Copilot | 194 | 29 | 6 | 74 |
| tombch | 194 | 186 | 1 | 2 |
| theosanderson-agent | 146 | 107 | 11 | 18 |
| alejandra-gonzalezsanchez | 94 | 59 | 12 | 10 |
| emmahodcroft | 85 | 1 | 1 | 60 |
| Taepper | 64 | 18 | 9 | 28 |
| chatgpt-codex-connector[bot] | 60 | 0 | 0 | 38 |
| rneher | 51 | 2 | 2 | 36 |
| copilot-pull-request-reviewer[bot] | 25 | 0 | 0 | 9 |
| rambaut | 19 | 0 | 0 | 11 |
Recent activity
Latest issues, pull requests and releases
- Pull request#7148anna-parker2026-08-25 14:22
- Pull request#7130corneliusroemer2026-08-21 16:28
- Pull request#7125corneliusroemer2026-08-21 16:13
- Pull request#7112dependabot[bot]2026-08-19 18:13
- Issue#7110claude[bot]2026-08-19 18:00raw-reads-processing: send slack notifications if deacon server panics/crashes and the pod needs to be restarted
- Pull request#6923snehasaisneha2026-07-27 12:48
- Pull request#6922claude[bot]2026-07-17 18:48
- Pull request#6899dependabot[bot]2026-07-10 14:38
- Pull request#6831dependabot[bot]2026-07-01 17:54
- Pull request#6831dependabot[bot]2026-07-01 17:54
- Pull request#6831dependabot[bot]2026-07-01 17:54
- Pull request#6831dependabot[bot]2026-07-01 17:54
- Pull request#6829dependabot[bot]2026-07-01 17:54
- Pull request#6801anna-parker2026-06-30 08:15
- Issue comment#6799corneliusroemer2026-06-30 01:07Rendered metadata silently replaces newlines with spaces, line breaks neither render nor roundtrip well in single sequence revision form
- Issue#6771anna-parker2026-06-25 23:56Configure S3 lifecycle rules on AWS
- Issue#4007anna-parker2026-06-24 20:38Raw Reads: Define mandatory metadata fields
- Issue#4573anna-parker2026-06-24 20:37File upload: data upload form does not handle revise case
- Pull request#6746theosanderson-agent2026-06-24 17:46
- Pull request#6738theosanderson-agent2026-06-24 17:42
- Pull request#6653anna-parker2026-06-15 13:47
- Issue comment#6638claude[bot]2026-06-09 14:50refactor(backend): centralize accession version parsing
- Pull request#6622anna-parker2026-06-05 07:37
- Pull request#6574theosanderson2026-06-01 10:45
- Issue#6540corneliusroemer2026-05-29 12:39Don't error on backend timeouts in prepro but retry with exponential backoff. Only fail after a while.
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 39 stars here means stars gained during the window, not the repo's star count.