A fast approximate aligner for long DNA sequences
active 2023-10-08 → 2026-01-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 821 days from 2023-10-08 to 2026-01-05. Pushes: 5 total, peak 2 in a day. Pull requests: 5 total, peak 2 in a day. Issues: 7 total, peak 1 in a day. Comments: 14 total, peak 2 in a day. Stars: 37 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| bkille | 17 | 5 | 5 | 7 |
| jianshu93 | 5 | 0 | 0 | 2 |
| AaronRuben | 2 | 0 | 0 | 2 |
| pesho-ivanov | 2 | 0 | 0 | 2 |
| JWDebler | 1 | 0 | 0 | 0 |
| mxwang66 | 1 | 0 | 0 | 0 |
| ekg | 1 | 0 | 0 | 1 |
| steven-solar | 1 | 0 | 0 | 0 |
| Dentalium | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#74pesho-ivanov2025-02-06 03:44Memory required for Human Genome.
- Issue comment#74pesho-ivanov2025-02-02 10:22Memory required for Human Genome.
- Issue comment#73bkille2025-02-01 19:23PAF format and identity problem
- Issue comment#74bkille2025-02-01 19:10Memory required for Human Genome.
- Issue#73jianshu932025-01-26 07:09PAF format and identity problem
- Issue#72mxwang662024-11-24 06:24libblis.so.4 not found via bioconda installation
- Issue comment#70AaronRuben2024-10-20 14:30Inconsistent alignments depending on whether reference file is gzipped or not
- Issue comment#70AaronRuben2024-10-11 20:44Inconsistent alignments depending on whether reference file is gzipped or not
- Pull request#71bkille2024-10-11 18:54
- Pull request#71bkille2024-10-11 17:41
- Issue#69Dentalium2024-09-21 03:59Meanings of fields of output paf file.
- Issue#67JWDebler2024-02-12 02:19Can't find precompiled binaries
- Pull request#66bkille2023-12-24 01:31
- Issue comment#65bkille2023-12-17 02:18Mash distance?
- Issue#65jianshu932023-12-13 07:10Mash distance?
- Issue comment#65jianshu932023-12-12 05:53Mash distance?
- Issue comment#65bkille2023-12-12 05:04Mash distance?
- Issue#65jianshu932023-12-12 03:10Mash distance?
- Pull request#64bkille2023-11-30 03:26
- Pull request#64bkille2023-11-30 01:44
- Issue comment#35ekg2023-11-19 22:26output conversion to SAM/BAM file
- Issue comment#35bkille2023-11-19 19:03output conversion to SAM/BAM file
- Issue comment#53bkille2023-11-03 22:38Installation issue with cmake --build build
- Issue comment#57jianshu932023-10-28 19:19bottom K sketch time complexity
- Issue comment#63bkille2023-10-13 21:11Outputs lower than specific percent identity threshold
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 37 stars here means stars gained during the window, not the repo's star count.