calling absolute copy numbers on single cell DNA sequencing data - stagging repo for public release
active 2023-12-06 → 2026-07-21 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 959 days from 2023-12-06 to 2026-07-21. Pushes: 31 total, peak 6 in a day. Pull requests: 6 total, peak 3 in a day. Issues: 11 total, peak 3 in a day. Comments: 11 total, peak 3 in a day. Stars: 3 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| leachim | 23 | 9 | 1 | 6 |
| shafighi | 22 | 16 | 5 | 1 |
| leachim-machine | 5 | 5 | 0 | 0 |
| TBradley27 | 4 | 0 | 0 | 2 |
| Urja25 | 3 | 0 | 0 | 2 |
| SenLiBio | 1 | 0 | 0 | 0 |
| AustinReed-1 | 1 | 1 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#34shafighi2026-06-01 13:50
- Pull request#33shafighi2026-05-03 09:10
- Pull request#33shafighi2026-05-03 09:10
- Pull request#32shafighi2026-05-03 08:51
- Issue#29TBradley272025-02-23 17:51Conda environment for read density estimation cannot activate
- Issue#28SenLiBio2025-01-09 22:25Error: MissingOutputException
- Issue#27leachim2024-09-21 17:47pseudodiploid/haploid cells as output
- Issue comment#27Urja252024-09-13 11:23pseudodiploid/haploid cells as output
- Issue comment#27leachim2024-09-13 05:42pseudodiploid/haploid cells as output
- Issue comment#27leachim2024-08-22 19:54pseudodiploid/haploid cells as output
- Issue comment#27leachim2024-08-22 19:48pseudodiploid/haploid cells as output
- Issue comment#27leachim2024-08-22 19:48pseudodiploid/haploid cells as output
- Issue comment#26TBradley272024-08-21 20:51No text editors installed in the scAbsolute image
- Issue comment#27Urja252024-08-15 12:50pseudodiploid/haploid cells as output
- Issue comment#27leachim2024-08-15 11:44pseudodiploid/haploid cells as output
- Issue comment#26leachim2024-08-15 11:35No text editors installed in the scAbsolute image
- Issue#26leachim2024-08-15 11:35No text editors installed in the scAbsolute image
- Issue#27Urja252024-08-15 11:30pseudodiploid/haploid cells as output
- Issue comment#21TBradley272024-04-14 07:59Instruction/control of read duplicate marking
- Issue#21TBradley272024-03-23 09:40Instruction/control of read duplicate marking
- Pull request#19leachim2024-03-06 05:53
- Issue#11leachim2024-02-21 23:49Test this on snakemake v8.0.0
- Issue#17leachim2024-02-21 23:48add aws to requirements to access public aws registry
- Issue#13leachim2024-01-06 19:07Publish docker code
- Issue#12leachim2024-01-06 19:06Add tutorial for scUnique paper
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 3 stars here means stars gained during the window, not the repo's star count.