☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
active 2023-12-18 → 2025-10-24 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 677 days from 2023-12-18 to 2025-10-24. Pushes: 28 total, peak 8 in a day. Pull requests: 1 total, peak 1 in a day. Issues: 9 total, peak 3 in a day. Comments: 4 total, peak 3 in a day. Stars: 14 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| Vini2 | 39 | 28 | 1 | 3 |
| GavinHuttley | 1 | 0 | 0 | 0 |
| dependabot[bot] | 1 | 0 | 0 | 1 |
| priscalim00 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#25dependabot[bot]2025-10-24 04:53Bump jinja2 from 3.1.4 to 3.1.6 in /docs
- ReleaseVini22024-09-26 04:49GraphBin2 v1.3.3
- Issue#23priscalim002024-08-23 17:48Error running prepResult
- ReleaseVini22024-08-06 04:04GraphBin2 v1.3.1
- ReleaseVini22024-08-06 03:58GraphBin2 v1.3.1
- Issue#22Vini22024-08-06 02:24ENH: Separate bins into individual FASTA files
- Issue#20Vini22024-08-06 02:22DEV: convert code to using cogent3 for sequence handling
- Issue#22Vini22024-08-06 00:52ENH: Separate bins into individual FASTA files
- ReleaseVini22024-07-26 06:33GraphBin2 v1.3.0
- Issue comment#9Vini22024-07-24 06:11Should GraphBin/GraphBin2 operate on the contigs of metaFlye assemblies?
- Issue#9Vini22024-07-24 06:11Should GraphBin/GraphBin2 operate on the contigs of metaFlye assemblies?
- Issue comment#11Vini22024-07-24 06:09Cannot find gfa2fasta.py
- Issue#11Vini22024-07-24 06:09Cannot find gfa2fasta.py
- Issue comment#21Vini22024-07-24 02:26Added support for Canu and other assembler gfas
- Issue#20GavinHuttley2024-06-07 05:25DEV: convert code to using cogent3 for sequence handling
- Pull request#19Vini22024-05-07 06:59
- Issue#13Vini22024-04-18 04:44prepResult.py produces output with single bin assignment from metabat2 initial binning
- Issue#16Vini22024-04-18 04:42Attribute error whilst running GraphBin2
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 14 stars here means stars gained during the window, not the repo's star count.