Tool to find regions of homozygosity (ROHs) from sequencing data.
active 2023-09-01 → 2025-10-24 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 785 days from 2023-09-01 to 2025-10-24. Pushes: 1 total, peak 1 in a day. Pull requests: 0 total, peak 0 in a day. Issues: 10 total, peak 2 in a day. Comments: 4 total, peak 1 in a day. Stars: 6 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| mquinodo | 6 | 1 | 0 | 2 |
| Arth032 | 2 | 0 | 0 | 1 |
| wangDanHua1 | 2 | 0 | 0 | 1 |
| jdalino | 1 | 0 | 0 | 0 |
| geocarvalho | 1 | 0 | 0 | 0 |
| ma-hashmi | 1 | 0 | 0 | 0 |
| pelinozsoz | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#33pelinozsoz2025-10-24 08:30ROH detection issue using AutoMap test dataset (no regions detected after filtering)
- Issue#32ma-hashmi2025-10-20 09:26AutoMap v1.3 rejects PAV VCFs: “## ERROR: Less than 10,000 variants (0 detected variants) with AD (or AO) and DP available. Exit."
- Issue#29mquinodo2025-07-24 14:34--panel argument not working
- Issue#31jdalino2025-07-18 08:41Request: Add a LICENSE file to the project
- Issue#22mquinodo2025-01-03 09:20Empty output for the test case
- Issue#25mquinodo2025-01-03 09:20issues with bcftools version.
- Issue comment#23mquinodo2024-08-16 13:33getting bcftools error when running AutoMap_v1.2.sh script on singularity container
- Issue#23mquinodo2024-05-28 15:58getting bcftools error when running AutoMap_v1.2.sh script on singularity container
- Issue comment#23Arth0322024-03-26 04:22getting bcftools error when running AutoMap_v1.2.sh script on singularity container
- Issue comment#24wangDanHua12024-03-01 08:29Less than 10,000 variants (0 detected variants) with AD (or AO) and DP available
- Issue#24wangDanHua12024-03-01 07:22Less than 10,000 variants (0 detected variants) with AD (or AO) and DP available
- Issue#23Arth0322024-02-24 06:07getting bcftools error when running AutoMap_v1.2.sh script on singularity container
- Issue comment#22mquinodo2023-09-11 06:56Empty output for the test case
- Issue#22geocarvalho2023-09-01 23:48Empty output for the test case
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 6 stars here means stars gained during the window, not the repo's star count.