Create, modify and analyse phylogenetic trees in R
active 2024-03-29 → 2026-07-30 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 854 days from 2024-03-29 to 2026-07-30. Pushes: 482 total, peak 45 in a day. Pull requests: 70 total, peak 10 in a day. Issues: 13 total, peak 5 in a day. Comments: 224 total, peak 31 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| ms609 | 469 | 369 | 65 | 19 |
| github-actions[bot] | 243 | 98 | 0 | 143 |
| Copilot | 53 | 15 | 5 | 21 |
| codecov[bot] | 33 | 0 | 0 | 33 |
| HS6986 | 5 | 0 | 0 | 4 |
| kuang-da | 1 | 0 | 0 | 0 |
| RussellGarwood | 1 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#170github-actions[bot]2026-06-11 09:03CI build failure
- Issue comment#170github-actions[bot]2026-05-21 08:04CI build failure
- Issue comment#170github-actions[bot]2026-04-16 06:22CI build failure
- Issue comment#170github-actions[bot]2026-04-09 06:12CI build failure
- Issue comment#264github-actions[bot]2026-03-20 08:19Drop stringi dependency
- Issue comment#263codecov[bot]2026-03-19 21:10cpp_edge_to_splits_batch
- Issue comment#261github-actions[bot]2026-03-17 11:49Fix PhyDatToMatrix crash on zero-character phyDat
- Issue comment#260github-actions[bot]2026-03-13 14:20`duplicated.Splits()`
- Issue comment#255codecov[bot]2026-03-10 07:34External tree number
- Issue comment#254codecov[bot]2026-03-09 23:11Tree numbers for larger trees
- Issue comment#252github-actions[bot]2026-02-17 08:23Add efficient ClusterTable-based split_frequencies C++ function for SplitFrequency(NULL)
- Issue comment#250github-actions[bot]2026-02-16 12:20Frequency of ALL splits
- Pull request#247ms6092026-02-10 10:36
- Issue comment#247github-actions[bot]2026-02-10 08:09`FirstMatchingSplit()`
- Pull request#247ms6092026-02-10 07:59
- Issue comment#246github-actions[bot]2026-02-09 09:36RenumberTree(): numeric tipOrder
- Pull request#246ms6092026-02-09 06:51
- Pull request#245ms6092026-02-05 13:28
- Issue comment#243ms6092026-02-05 08:33Fix consensus_tree segfault on arm64 by implementing dynamic stack/heap allocation
- Pull request#243Copilot2026-02-04 12:36
- Issue comment#170github-actions[bot]2026-01-29 05:13CI build failure
- Issue comment#170github-actions[bot]2026-01-29 05:12CI build failure
- Issue comment#170github-actions[bot]2026-01-29 05:10CI build failure
- Issue#240ms6092026-01-06 07:54Support >2048 leaves in `splits_to_edge()`
- Issue comment#241github-actions[bot]2026-01-06 07:42Large tree support: `SplitList`
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.