Seasonal influenza variant growth rates and frequency forecasts
active 2025-07-08 → 2026-05-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 302 days from 2025-07-08 to 2026-05-05. Pushes: 32 total, peak 4 in a day. Pull requests: 7 total, peak 1 in a day. Issues: 10 total, peak 2 in a day. Comments: 14 total, peak 4 in a day. Stars: 1 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| huddlej | 49 | 29 | 4 | 5 |
| trvrb | 9 | 1 | 3 | 5 |
| jameshadfield | 5 | 1 | 0 | 2 |
| joverlee521 | 4 | 0 | 0 | 1 |
| keepgoing1995 | 2 | 0 | 0 | 1 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#35huddlej2026-02-24 17:24Allow users to filter display of location and variant in the interactive visualization and URL parameters
- Issue comment#39jameshadfield2026-02-19 22:59Save frequencies/GA panel to figure
- Issue#40huddlej2026-02-19 22:47Pivot variant does not get plotted in GA panels
- Issue#39huddlej2026-02-19 22:45Save frequencies/GA panel to figure
- Issue#32huddlej2026-02-09 23:42Report mean frequencies instead of median
- Issue comment#32huddlej2026-02-06 22:15Report mean frequencies instead of median
- Issue#37huddlej2026-02-05 22:36Try to use evofr's run-model command instead of local copy of that script
- Issue#37huddlej2026-02-05 22:36Try to use evofr's run-model command instead of local copy of that script
- Issue#34huddlej2026-01-20 19:35Describe filters applied to data alongside the interactive visualizations
- Issue#31huddlej2026-01-19 13:53Display inclusive frequencies for named clades
- Issue#29huddlej2026-01-14 00:07Collapse low-count emerging/amino acid haplotypes into parental haplotypes instead of "other"
- Issue comment#28huddlej2026-01-13 21:05Fallback to original URL format for older models
- Pull request#26huddlej2025-12-23 22:03
- Issue comment#26huddlej2025-12-23 21:14Add support to model AA haplotypes
- Pull request#25huddlej2025-10-23 19:23
- Issue comment#19huddlej2025-10-22 00:01Add raw data values to the visualization.
- Issue comment#19keepgoing19952025-10-18 23:23Add raw data values to the visualization.
- Pull request#24huddlej2025-09-29 15:11
- Issue comment#24trvrb2025-09-24 05:08Move from biweekly aggregation to weekly aggregation
- Pull request#24trvrb2025-09-24 03:20
- Issue comment#21trvrb2025-09-21 21:42Adding heterogeneity flag
- Pull request#23trvrb2025-09-21 13:23
- Pull request#22trvrb2025-09-18 02:50
- Issue#20huddlej2025-09-11 20:22Release forecasts-flu as a nextstrain.org URL
- Pull request#18huddlej2025-08-04 19:04
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 1 stars here means stars gained during the window, not the repo's star count.