Nextflow workflow for calling structural variants
active 2024-02-28 → 2026-06-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 849 days from 2024-02-28 to 2026-06-25. Pushes: 200 total, peak 21 in a day. Pull requests: 54 total, peak 4 in a day. Issues: 31 total, peak 3 in a day. Comments: 71 total, peak 11 in a day. Stars: 21 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nvnieuwk | 307 | 169 | 48 | 47 |
| mvheetve | 70 | 1 | 5 | 19 |
| github-actions[bot] | 30 | 30 | 0 | 0 |
| matthdsm | 10 | 0 | 0 | 5 |
Recent activity
Latest issues, pull requests and releases
- Pull request#129nvnieuwk2026-02-23 13:22
- Pull request#122nvnieuwk2026-01-12 09:10
- Issue#121mvheetve2025-10-07 08:53gtf option needs a dynamic default
- Pull request#117nvnieuwk2025-09-17 08:07
- Pull request#118nvnieuwk2025-09-17 08:06
- Pull request#118nvnieuwk2025-08-14 14:49
- Issue comment#117nvnieuwk2025-07-29 08:11Add GATK4_SVANNOTATE
- Issue comment#117mvheetve2025-07-29 07:40Add GATK4_SVANNOTATE
- Pull request#117nvnieuwk2025-07-22 11:01
- Issue comment#116nvnieuwk2025-07-16 13:29bump annotsv modules
- Pull request#115nvnieuwk2025-07-10 14:36
- Issue comment#114nvnieuwk2025-07-09 11:58sort annotsv VCFs
- Issue#113nvnieuwk2025-06-24 07:02Investigae the use of dysgu
- Issue#49nvnieuwk2025-02-21 10:48Add VCF to BEDPE conversion
- Issue#107nvnieuwk2025-02-21 10:48`--annotations_filter` should become a common filter option
- Issue#110nvnieuwk2025-02-21 10:48Parallelize `delly call` on SV type
- Pull request#109nvnieuwk2025-02-21 10:48
- Pull request#112nvnieuwk2025-02-21 09:42
- Pull request#111nvnieuwk2025-02-21 08:48
- Pull request#111nvnieuwk2025-02-13 15:52
- Issue#110nvnieuwk2025-02-13 12:38Parallelize `delly call` on SV type
- Pull request#109nvnieuwk2025-02-12 13:08
- Issue comment#106nvnieuwk2025-02-11 15:34Decouple vcfanno from the `--annotate` parameter when vcfanno-specific options have been given
- Issue#106nvnieuwk2025-02-11 15:34Decouple vcfanno from the `--annotate` parameter when vcfanno-specific options have been given
- Pull request#108nvnieuwk2025-02-11 08:50
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 21 stars here means stars gained during the window, not the repo's star count.