Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
active 2025-02-20 → 2026-05-11 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 446 days from 2025-02-20 to 2026-05-11. Pushes: 64 total, peak 5 in a day. Pull requests: 69 total, peak 5 in a day. Issues: 14 total, peak 2 in a day. Comments: 237 total, peak 15 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nvnieuwk | 270 | 43 | 40 | 101 |
| fulaibaowang | 149 | 6 | 15 | 62 |
| nf-core-bot | 38 | 2 | 4 | 32 |
| AtaJadidAhari | 28 | 4 | 3 | 13 |
| drewjbeh | 26 | 0 | 1 | 12 |
| maxulysse | 3 | 0 | 0 | 1 |
| matthdsm | 2 | 1 | 0 | 0 |
| mashehu | 2 | 0 | 0 | 0 |
| arvindsundaram | 2 | 0 | 0 | 1 |
| igorh27 | 1 | 0 | 0 | 0 |
| c-mertes | 1 | 0 | 0 | 1 |
| jfy133 | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#98AtaJadidAhari2026-03-17 08:26
- Pull request#96nvnieuwk2026-02-10 10:06
- Issue comment#95nf-core-bot2026-02-10 10:04add test_full config
- Pull request#93AtaJadidAhari2026-01-09 09:06
- Issue comment#93nf-core-bot2025-12-29 14:21multithread gene expression counting per chromosome
- Pull request#91AtaJadidAhari2025-12-15 19:07
- Pull request#90nf-core-bot2025-11-20 09:31
- Issue comment#89AtaJadidAhari2025-11-13 08:43Update OUTRIDER version to 1.26.3
- Issue comment#88nf-core-bot2025-11-03 15:54Update to new runner size syntax
- Pull request#80fulaibaowang2025-09-19 11:54
- Issue comment#80fulaibaowang2025-09-19 11:54remove navi bar for merged multiqc report
- Pull request#83fulaibaowang2025-09-19 10:35
- Issue comment#75fulaibaowang2025-09-18 11:24gz files cannot be handled due to R.utils missing
- Issue comment#61nvnieuwk2025-09-18 10:48test on a real dataset
- Issue comment#78fulaibaowang2025-09-18 09:38there is sample mismatch in MAEQC_DNARNAMATRIX and MAEQC_DNARNAMATRIXPLOT
- Pull request#82fulaibaowang2025-09-18 07:32
- Pull request#69nvnieuwk2025-09-16 12:18
- Issue comment#61fulaibaowang2025-09-12 12:12test on a real dataset
- Issue#60fulaibaowang2025-09-12 08:58DNA_ID shall also be in the header in VCF files.
- Issue comment#60fulaibaowang2025-09-12 08:58DNA_ID shall also be in the header in VCF files.
- Pull request#79nvnieuwk2025-09-12 08:56
- Issue comment#61nvnieuwk2025-09-12 08:56test on a real dataset
- Issue comment#61fulaibaowang2025-09-12 08:48test on a real dataset
- Pull request#77fulaibaowang2025-09-09 08:20
- Issue comment#5nvnieuwk2025-09-08 15:08Convert snakemake parameters to nf-core compatible parameters
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.