Assembly and scaffolding of metagenomes from long ONT reads
active 2023-09-26 → 2026-08-07 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1047 days from 2023-09-26 to 2026-08-07. Pushes: 130 total, peak 11 in a day. Pull requests: 172 total, peak 19 in a day. Issues: 67 total, peak 20 in a day. Comments: 432 total, peak 46 in a day. Stars: 15 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nschan | 622 | 110 | 141 | 201 |
| mirpedrol | 90 | 0 | 0 | 50 |
| LouisLeNezet | 88 | 0 | 0 | 38 |
| nf-core-bot | 57 | 16 | 25 | 16 |
| mahesh-panchal | 40 | 0 | 0 | 33 |
| d4straub | 33 | 0 | 0 | 23 |
| maxulysse | 17 | 1 | 1 | 5 |
| mashehu | 14 | 0 | 0 | 6 |
| jfy133 | 14 | 1 | 0 | 7 |
| github-actions[bot] | 13 | 0 | 0 | 12 |
| vagkaratzas | 12 | 0 | 0 | 10 |
| jkh00 | 12 | 0 | 0 | 1 |
| BrunoBertolasi | 10 | 0 | 0 | 9 |
| nvnieuwk | 9 | 0 | 1 | 3 |
| cchapus | 6 | 0 | 0 | 5 |
| muffato | 6 | 0 | 0 | 3 |
| sajjadasaf | 3 | 0 | 0 | 2 |
| alexpmagalhaes | 3 | 0 | 0 | 1 |
| fka21 | 3 | 0 | 0 | 2 |
| fellen31 | 3 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#186github-actions[bot]2026-07-05 00:28GENOMESCOPE module fails with exit 127 — genomescope.R not in container PATH (v1.1.0)
- Issue#186github-actions[bot]2026-06-14 00:36GENOMESCOPE module fails with exit 127 — genomescope.R not in container PATH (v1.1.0)
- Issue comment#186github-actions[bot]2026-06-14 00:36GENOMESCOPE module fails with exit 127 — genomescope.R not in container PATH (v1.1.0)
- Issue#186nschan2026-05-11 11:10GENOMESCOPE module fails with exit 127 — genomescope.R not in container PATH (v1.1.0)
- Issue comment#184nschan2026-03-29 13:22Nextflow reports (resource usage) not working
- Issue comment#171vagkaratzas2026-02-20 12:19v2.0.0: Refactor for sample-wise parameterisation
- Issue comment#171nschan2026-02-20 08:44v2.0.0: Refactor for sample-wise parameterisation
- Issue comment#181afonsoguerra2026-02-14 15:32Use CSI indexes for BAMs instead of BAI indexes.
- Issue#178nschan2025-11-20 08:33QUAST QC step fails when running de novo assembly without reference genome
- Issue#178wbau2025-11-20 02:16QUAST QC step fails when running de novo assembly without reference genome
- Issue comment#176nschan2025-09-18 07:16Possible typo in container URL for Medaka
- Pull request#176nschan2025-09-18 07:15
- Pull request#176TomHarrop2025-09-18 01:00
- Issue comment#171nschan2025-09-04 14:23v2.0.0: Refactor for sample-wise parameterisation
- Issue comment#175nschan2025-08-01 09:30Multiindexing of minimap2
- Issue#175nschan2025-08-01 09:30Multiindexing of minimap2
- Issue comment#175nschan2025-07-31 09:38Multiindexing of minimap2
- Issue comment#175fka212025-07-31 09:27Multiindexing of minimap2
- Issue comment#175nschan2025-07-31 07:12Multiindexing of minimap2
- Issue comment#175fka212025-07-31 06:26Multiindexing of minimap2
- Issue#175fka212025-07-28 11:03Multiindexing of minimap2
- Releasenschan2025-07-21 10:581.1.0 - Aluminium Pigeon 'Brass Pigeon'
- Pull request#174nschan2025-07-21 08:43
- Issue comment#156nschan2025-07-21 08:36Release v.1.1.0
- Pull request#174nschan2025-07-21 08:32
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 15 stars here means stars gained during the window, not the repo's star count.