Proteomics label-free quantification (LFQ) analysis pipeline
active 2023-08-16 → 2025-12-03 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 841 days from 2023-08-16 to 2025-12-03. Pushes: 9 total, peak 1 in a day. Pull requests: 15 total, peak 2 in a day. Issues: 12 total, peak 8 in a day. Comments: 8 total, peak 2 in a day. Stars: 5 total, peak 2 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| nf-core-bot | 28 | 8 | 15 | 5 |
| ypriverol | 9 | 0 | 0 | 1 |
| jpfeuffer | 2 | 0 | 0 | 2 |
| luozhy88 | 1 | 0 | 0 | 0 |
| jfy133 | 1 | 1 | 0 | 0 |
| jonasscheid | 1 | 0 | 0 | 0 |
| jen-reeve | 1 | 0 | 0 | 0 |
| FriederikeHanssen | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue#211jen-reeve2025-03-25 00:40JSON schema: Proteomicslfq
- Issue#172ypriverol2025-03-14 07:28proteomicslfq to DSL2
- Issue#50ypriverol2025-03-14 07:22QC report
- Issue#75ypriverol2025-03-14 07:21Allow auto download of the reference proteome fasta for a given organism
- Issue#54ypriverol2025-03-14 07:03Refine defaults and fallbacks in engine parameters
- Issue#206ypriverol2025-03-14 06:55proteomicslfq and MaxQuant
- Issue#193ypriverol2025-03-14 06:52Error executing process > 'search_engine_comet (1)'
- Issue#192ypriverol2025-03-14 06:52Question about the mzTab output format
- Issue#184ypriverol2025-03-14 06:51PRIDE ftp for localize test moved
- Issue comment#210jpfeuffer2025-03-13 20:39nf-core spring cleaning 2025: Overlap with quantms?
- Issue comment#210ypriverol2025-03-13 10:52nf-core spring cleaning 2025: Overlap with quantms?
- Issue#210jonasscheid2025-03-13 07:55nf-core spring cleaning 2025: Overlap with quantms?
- Issue comment#208nf-core-bot2024-05-09 12:19Important! Template update for nf-core/tools v2.14.0
- Pull request#208nf-core-bot2024-05-09 12:19
- Pull request#207nf-core-bot2024-05-08 15:36
- Issue comment#207nf-core-bot2024-05-08 15:36Important! Template update for nf-core/tools v2.13.1
- Pull request#208nf-core-bot2024-05-08 15:36
- Pull request#205nf-core-bot2024-02-29 16:11
- Pull request#207nf-core-bot2024-02-29 16:11
- Issue#206luozhy882024-02-24 14:56proteomicslfq and MaxQuant
- Pull request#204nf-core-bot2024-02-20 16:08
- Pull request#205nf-core-bot2024-02-20 16:08
- Pull request#203nf-core-bot2024-01-29 15:12
- Pull request#204nf-core-bot2024-01-29 15:12
- Issue comment#202nf-core-bot2023-12-20 15:57Important! Template update for nf-core/tools v2.11
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.