Pipeline for Sequential Analysis of MacroMolecules accessibilitY sequencing (SAMMY-seq) data, to analyze chromatin state.
active 2023-10-06 → 2026-07-25 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 1024 days from 2023-10-06 to 2026-07-25. Pushes: 185 total, peak 11 in a day. Pull requests: 85 total, peak 6 in a day. Issues: 78 total, peak 9 in a day. Comments: 84 total, peak 6 in a day. Stars: 5 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| daisymut | 194 | 91 | 32 | 11 |
| ugoiannacchero | 115 | 53 | 20 | 18 |
| nf-core-bot | 58 | 23 | 23 | 12 |
| github-actions[bot] | 23 | 0 | 0 | 23 |
| nadiaxaidan | 23 | 9 | 2 | 1 |
| lucidif | 11 | 4 | 3 | 1 |
| nvnieuwk | 9 | 0 | 0 | 3 |
| mirpedrol | 7 | 1 | 1 | 3 |
| charles-plessy | 6 | 0 | 0 | 4 |
| Fra1197 | 6 | 1 | 0 | 0 |
| MarcoRice | 5 | 1 | 1 | 2 |
| d4straub | 4 | 0 | 0 | 1 |
| Marinicla | 4 | 0 | 2 | 1 |
| jonathan-f | 3 | 0 | 0 | 1 |
| elasline | 3 | 1 | 0 | 0 |
| mashehu | 2 | 0 | 0 | 1 |
| maxulysse | 2 | 0 | 0 | 0 |
| Lilarickli | 2 | 0 | 0 | 2 |
| fferrari | 1 | 0 | 1 | 0 |
| phue | 1 | 0 | 0 | 0 |
Recent activity
Latest issues, pull requests and releases
- Pull request#123nf-core-bot2025-11-20 09:32
- Issue comment#122jonathan-f2025-11-18 08:36Differential solubility analysis error
- Issue comment#122ugoiannacchero2025-11-17 09:14Differential solubility analysis error
- Issue#122jonathan-f2025-11-17 08:47Differential solubility analysis error
- Issue#122jonathan-f2025-11-17 08:47Differential solubility analysis error
- Issue comment#120github-actions[bot]2025-11-05 09:28Include Cohen’s magnitude for all bins, including those below the threshold
- Pull request#120ugoiannacchero2025-11-05 09:25
- Pull request#119nadiaxaidan2025-11-04 12:41
- Issue#101daisymut2025-10-31 20:38Conforming to subworkflows standards: subworkflows/local/bigwig_plot_deeptools.nf
- Issue#102daisymut2025-10-31 20:38Conforming to subworkflows standards: subworkflows/local/cat_fractions.nf
- Issue#103daisymut2025-10-31 20:38Conforming to subworkflows standards: subworkflows/local/deeptools_qc.nf
- Issue#100nadiaxaidan2025-10-31 16:15Fixing parameters order in nextflow_schema.json
- Issue comment#117daisymut2025-10-31 15:13Pushing all new subworkflows and deleting old subworkflows single files
- Issue#118nadiaxaidan2025-10-30 12:12fixing WARN: genome_blacklist_regions
- Issue#118nadiaxaidan2025-10-30 12:12fixing WARN: genome_blacklist_regions
- Issue comment#117github-actions[bot]2025-10-29 14:57Pushing all new subworkflows and deleting old subworkflows single files
- Issue comment#115nadiaxaidan2025-10-28 18:47updating bigwig_plot_deeptools subworkflow
- Pull request#115nadiaxaidan2025-10-28 17:02
- Issue comment#113github-actions[bot]2025-10-28 15:05updating bigwig_plot_deeptools subworkflow
- Issue#107nadiaxaidan2025-10-28 10:49Conforming to subworkflows standards: subworkflows/local/generate_comparisons.nf
- Issue#104nadiaxaidan2025-10-28 10:49Conforming to subworkflows standards: subworkflows/local/faidx_cut_chr_size.nf
- Issue#103nadiaxaidan2025-10-28 10:48Conforming to subworkflows standards: subworkflows/local/deeptools_qc.nf
- Issue#102nadiaxaidan2025-10-28 10:48Conforming to subworkflows standards: subworkflows/local/cat_fractions.nf
- Issue#101daisymut2025-10-28 10:47Conforming to subworkflows standards: subworkflows/local/bigwig_plot_deeptools.nf
- Issue#109nadiaxaidan2025-10-28 09:54Conforming to subworkflows standards: subworkflows/local/input_check.nf
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 5 stars here means stars gained during the window, not the repo's star count.