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The tools for your .cool's

active 2023-08-172026-07-06 (UTC)

Partial coverage20,547 / 26,300 hourly files (78%) · 2 absent upstream · 5,750 failed, retryable2023-08-152026-08-14 (UTC)— sampled evenly across the window, so rankings and trends hold; absolute counts scale up.
Events
383
Pushes
24
Pull requests
27
Issues
45
Stars
31
Forks
8

Activity over time

Daily event counts in the loaded window

Line chart, 1055 days from 2023-08-17 to 2026-07-06. Pushes: 24 total, peak 4 in a day. Pull requests: 27 total, peak 3 in a day. Issues: 45 total, peak 4 in a day. Comments: 179 total, peak 15 in a day. Stars: 31 total, peak 2 in a day.

  • Pushes
  • Pull requests
  • Issues
  • Comments
  • Stars

Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.

Top contributors

Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity

ContributorContributionsPushesPRsComments
gfudenberg881150
sergpolly487526
nvictus4110515
Yaoyx270911
Phlya202016
ratheraarif140011
agalitsyna13425
yingsun-ucsd120012
dmalzl8016
danobaji5002
gdolsten4011
gschuette4011
mimakaev3001
ljw201804203002
mdozmorov3002
bskubi3002
review-notebook-app[bot]2002
haleybianchi2001
xiasijian2001
golobor2002

Recent activity

Latest issues, pull requests and releases

  • Pull request#568HyeonjeYang2026-07-06 05:06
  • Issue#563dmalzl2025-11-17 15:13
    rearrange fails if 'name' column is not present in provided view table
  • Issue#562oganesson762025-09-15 03:06
    cooltools.expected_cis is not applicable to circular chromosomes
  • Issue#561phil6222025-09-09 06:56
    Problem with Saddle-analyses
  • Issue comment#559golobor2025-07-24 14:39
    A discussion about counting bad bins and the meaning of unobserved contacts
  • Issue comment#559Phlya2025-07-24 14:04
    A discussion about counting bad bins and the meaning of unobserved contacts
  • Issue#559dmalzl2025-07-24 08:24
    A discussion about counting bad bins and the meaning of unobserved contacts
  • Issue comment#558Phlya2025-07-23 08:49
    Knight-Ruiz weights not allowed to be multiplicative
  • Issue#558dmalzl2025-07-23 08:28
    Knight-Ruiz weights not allowed to be multiplicative
  • Issue comment#557dmalzl2025-07-07 10:12
    respect dtypes of input file
  • Issue comment#557dmalzl2025-07-07 10:05
    respect dtypes of input file
  • Issue comment#557dmalzl2025-07-07 09:40
    respect dtypes of input file
  • Issue comment#557Phlya2025-07-07 09:38
    respect dtypes of input file
  • Issue comment#557dmalzl2025-07-07 08:41
    respect dtypes of input file
  • Pull request#557dmalzl2025-07-07 08:32
  • Issue comment#556dmalzl2025-07-05 17:11
    `rearrange.py` should respect count datatype of source cooler
  • Issue comment#556Phlya2025-07-05 17:05
    `rearrange.py` should respect count datatype of source cooler
  • Issue comment#555bskubi2025-06-30 22:05
    Cooltools pileup slow with mixed chromosomes
  • Issue comment#555Phlya2025-06-30 22:04
    Cooltools pileup slow with mixed chromosomes
  • Issue comment#555bskubi2025-06-30 22:01
    Cooltools pileup slow with mixed chromosomes
  • Issue comment#555Phlya2025-06-30 21:59
    Cooltools pileup slow with mixed chromosomes
  • Issue comment#554Phlya2025-06-30 19:22
    cooltools dotsfinder raises error when chromosomes are not sorted in a particular order
  • Issue comment#554dmalzl2025-06-30 19:18
    cooltools dotsfinder raises error when chromosomes are not sorted in a particular order
  • Issue comment#554gfudenberg2025-06-30 19:03
    cooltools dotsfinder raises error when chromosomes are not sorted in a particular order
  • Issue comment#552gfudenberg2025-06-30 18:58
    cooltools.dots

Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 31 stars here means stars gained during the window, not the repo's star count.