Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bug or have an idea for a new feature? Let us know at https://zettagenomics.com/academic/
active 2023-09-12 → 2026-03-05 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 906 days from 2023-09-12 to 2026-03-05. Pushes: 238 total, peak 10 in a day. Pull requests: 90 total, peak 4 in a day. Issues: 0 total, peak 0 in a day. Comments: 38 total, peak 3 in a day. Stars: 4 total, peak 1 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| juanfeSanahuja | 184 | 131 | 46 | 5 |
| jtarraga | 107 | 61 | 25 | 1 |
| j-coll | 58 | 23 | 11 | 6 |
| pfurio | 47 | 15 | 6 | 3 |
| imedina | 29 | 4 | 0 | 19 |
| ifiancu | 8 | 3 | 0 | 1 |
| Copilot | 5 | 0 | 0 | 3 |
| halender | 3 | 0 | 0 | 0 |
| juanrizetta | 3 | 0 | 0 | 0 |
| julie-sullivan | 2 | 1 | 1 | 0 |
| javild | 1 | 0 | 0 | 0 |
| dapregi | 1 | 0 | 0 | 0 |
| awab-ahmed | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#307imedina2025-12-19 11:13TASK-5564 - Update data sources for CellBase 6.x
- Pull request#307jtarraga2025-12-19 11:13
- Pull request#305jtarraga2025-11-13 06:44
- Issue comment#304imedina2025-10-22 21:19TASK-7809 - Upgrade avro version from 1.7.7 to 1.11.4
- Issue comment#302imedina2025-09-22 10:33TASK-7645 - Implement Variant Review and Summaries
- Pull request#302pfurio2025-09-22 10:33
- Issue comment#301imedina2025-09-15 11:33Portpatch 4.1.0 -> 5.0.0-SNAPSHOT
- Issue comment#300imedina2025-09-04 05:35Task 7892 - SIGSEGV error when running CosmicVariantAnnotationExtension
- Pull request#300jtarraga2025-09-04 05:35
- Issue comment#297juanfeSanahuja2025-08-13 09:35Adapt Biodata models to new COSMIC file version
- Pull request#299juanfeSanahuja2025-08-12 09:11
- Pull request#299juanfeSanahuja2025-08-11 09:31
- Releasegithub-actions[bot]2025-08-05 08:40v3.6.0
- Pull request#295juanfeSanahuja2025-07-02 13:50
- Pull request#298jtarraga2025-06-26 06:04
- Pull request#297jtarraga2025-06-26 06:01
- Pull request#296juanfeSanahuja2025-06-20 08:41
- Issue comment#295imedina2025-06-13 08:56Portpatch 3.5.0 -> 4.1.0-SNAPSHOT
- Pull request#291juanfeSanahuja2025-06-11 06:07
- Pull request#292juanfeSanahuja2025-06-10 16:53
- Pull request#288j-coll2025-06-05 10:10
- Pull request#290juanfeSanahuja2025-06-02 09:57
- Pull request#292juanfeSanahuja2025-05-28 07:48
- Issue comment#291imedina2025-05-28 07:47TASK-7693-rel - Upgrade Ubuntu image on GitHub Actions
- Pull request#291juanfeSanahuja2025-05-28 07:47
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 4 stars here means stars gained during the window, not the repo's star count.