List of Spatial Transcriptomics related Tools organized per category
active 2024-10-10 → 2026-07-16 (UTC)
Activity over time
Daily event counts in the loaded window
Line chart, 645 days from 2024-10-10 to 2026-07-16. Pushes: 38 total, peak 4 in a day. Pull requests: 11 total, peak 3 in a day. Issues: 2 total, peak 1 in a day. Comments: 4 total, peak 1 in a day. Stars: 33 total, peak 4 in a day.
- Pushes
- Pull requests
- Issues
- Comments
- Stars
Stars, PRs, issues and forks are under-captured in the later part of this window. GH Archive progressively stopped capturing non-push events during 2026 — −95% or worse by the end of the window. Every series here except Pushes fades for that reason, so a decline above reflects the archive, not this repository. Pushes stay reliable throughout, so read them, and the contributor counts derived from them, as the real signal. Data health has the measurements.
Top contributors
Pushes, PRs, issues, reviews and comments — stars and forks excluded, so this is contribution rather than popularity
| Contributor | Contributions | Pushes | PRs | Comments |
|---|---|---|---|---|
| p-gueguen | 39 | 32 | 1 | 4 |
| Copilot | 14 | 6 | 8 | 0 |
| cafferychen777 | 1 | 0 | 1 | 0 |
| KalinNonchev | 1 | 0 | 0 | 0 |
| matt-sd-watson | 1 | 0 | 1 | 0 |
Recent activity
Latest issues, pull requests and releases
- Issue comment#13p-gueguen2026-03-12 09:53Sugesstion for Spatial Trajectories and Niche clustering (Cell Niches & Tissue Domains) tool - ONTraC
- Pull request#10p-gueguen2026-03-02 08:21
- Pull request#10Copilot2026-03-02 08:16
- Pull request#9cafferychen7772026-01-06 21:42
- Issue comment#8p-gueguen2026-01-02 12:53Add FlashDeconv to Cell Deconvolution section
- Pull request#7Copilot2025-12-17 14:34
- Pull request#7Copilot2025-12-17 14:19
- Pull request#6Copilot2025-12-17 13:59
- Pull request#5Copilot2025-12-12 10:04
- Issue comment#5p-gueguen2025-12-12 09:47Add troutpy and novae spatial transcriptomics tools
- Pull request#5Copilot2025-12-12 09:22
- Pull request#4Copilot2025-11-28 09:44
- Pull request#4Copilot2025-11-28 09:44
- Pull request#2matt-sd-watson2025-10-28 16:27
- Issue comment#1p-gueguen2025-06-16 07:54Sugesstion for integration tool - AESTETIK
- Issue#1p-gueguen2025-06-16 07:54Sugesstion for integration tool - AESTETIK
- Issue#1KalinNonchev2025-06-15 16:23Sugesstion for integration tool - AESTETIK
Totals cover only the window loaded into ClickHouse and count events, not GitHub's lifetime totals — 33 stars here means stars gained during the window, not the repo's star count.